RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 DSG1Q02413 1049 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 NCBP1Q09161 790 aaKnown RBP11.91□□□□□ -0.5
PRPF3-203ENST00000467514 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 USP41Q3LFD5 358 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 PPM1LQ5SGD2 360 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 ARMCX5Q6P1M9 558 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 HACE1Q8IYU2 909 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 TMEM143Q96AN5 459 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 TRIM44Q96DX7 344 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-203ENST00000467514 B3GALT6Q96L58 329 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 ERGIC2Q96RQ1 377 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 MKNK1Q9BUB5 465 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 RPP25Q9BUL9 199 aaKnown RBP11.91□□□□□ -0.5
PRPF3-203ENST00000467514 OSBPL6Q9BZF3 934 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 KMT5AQ9NQR1 393 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 MARCH5Q9NX47 278 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 KCNG1Q9UIX4 513 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 TBX20Q9UMR3 447 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 ZKSCAN5Q9Y2L8 839 aa11.91□□□□□ -0.5
PRPF3-203ENST00000467514 MTF2Q9Y483 593 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-203ENST00000467514 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
PRPF3-203ENST00000467514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRPF3-203ENST00000467514 H0YCG3 227 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 ZMYND10O75800 440 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 PIGRP01833 764 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 SRGAP2CP0DJJ0 459 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 RPL17P18621 184 aaKnown RBP11.9□□□□□ -0.5
PRPF3-203ENST00000467514 RPL13P26373 211 aaKnown RBP11.9□□□□□ -0.5
PRPF3-203ENST00000467514 ABCD1P33897 745 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 MTIF2P46199 727 aaKnown RBP11.9□□□□□ -0.5
PRPF3-203ENST00000467514 CASP4P49662 377 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 AFF1P51825 1210 aaKnown RBP11.9□□□□□ -0.5
PRPF3-203ENST00000467514 NRLP54845 237 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 CAPSQ13938 189 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 PPP2R5AQ15172 486 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 VWA3BQ502W6 1294 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 IL31Q6EBC2 164 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 SLC39A4Q6P5W5 647 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 RSPO2Q6UXX9 243 aaPredicted RBP11.9□□□□□ -0.5
PRPF3-203ENST00000467514 ZNF852Q6ZMS4 543 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 HS2ST1Q7LGA3 356 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 ZBTB44Q8NCP5 570 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 IFT74Q96LB3 600 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 NELL2Q99435 816 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 KIFC3Q9BVG8 833 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 FAM126AQ9BYI3 521 aaPredicted RBP11.9□□□□□ -0.5
PRPF3-203ENST00000467514 NDST4Q9H3R1 872 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 RXFP1Q9HBX9 757 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 ANGPTL2Q9UKU9 493 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 NDRG2Q9UN36 371 aaKnown RBP11.9□□□□□ -0.5
PRPF3-203ENST00000467514 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
PRPF3-203ENST00000467514 MYH11P35749 1972 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 USP24Q9UPU5 2620 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 CCDC169A6NNP5 214 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 TISP43B9A030 160 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 CLIC2O15247 247 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 CCL16O15467 120 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 TADA2AO75478 443 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 TARSP26639 723 aaKnown RBP11.89□□□□□ -0.51
PRPF3-203ENST00000467514 ADSSP30520 456 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 SCNN1GP51170 649 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 NTHL1P78549 312 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 CEP135Q66GS9 1140 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 CDCA2Q69YH5 1023 aaPredicted RBP11.89□□□□□ -0.51
PRPF3-203ENST00000467514 LAIR1Q6GTX8 287 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 FUT10Q6P4F1 479 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 CEP57Q86XR8 500 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 LRRC8AQ8IWT6 810 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 COLGALT2Q8IYK4 626 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 CCDC150Q8NCX0 1101 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 TCP11Q8WWU5 503 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
PRPF3-203ENST00000467514 FGF13Q92913 245 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
PRPF3-203ENST00000467514 GAD1Q99259 594 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 TTYH3Q9C0H2 523 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 TMEM134Q9H6X4 195 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 PARD6AQ9NPB6 346 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 RALYQ9UKM9 306 aaKnown RBP11.89□□□□□ -0.51
PRPF3-203ENST00000467514 SIK3Q9Y2K2 1263 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 STYXL1Q9Y6J8 313 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 DOCK6Q96HP0 2047 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 BAHCC1Q9P281 2608 aa11.89□□□□□ -0.51
PRPF3-203ENST00000467514 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 ANKRD63C9JTQ0 380 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 SLC30A4O14863 429 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 MAPK13O15264 365 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 GYPCP04921 128 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 C8AP07357 584 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-203ENST00000467514 FECHP22830 423 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 PSMC2P35998 433 aaKnown RBP11.88□□□□□ -0.51
PRPF3-203ENST00000467514 CCZ1BP86790 482 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 CCZ1P86791 482 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-203ENST00000467514 UBXN1Q04323 297 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 LRMPQ12912 555 aa11.88□□□□□ -0.51
PRPF3-203ENST00000467514 CCDC40Q4G0X9 1142 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms