RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 UROC1Q96N76 676 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 MMS19Q96T76 1030 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 ISCUQ9H1K1 167 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 LZTFL1Q9NQ48 299 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
COL4A1-202ENST00000467182 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 FANCGO15287 622 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 HCRTO43612 131 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 IPO7O95373 1038 aaKnown RBP13.86□□□□□ -0.19
COL4A1-202ENST00000467182 FAM163BP0C2L3 166 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 GZMAP12544 262 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 RAG1P15918 1043 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 WARSP23381 471 aaKnown RBP13.86□□□□□ -0.19
COL4A1-202ENST00000467182 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
COL4A1-202ENST00000467182 IKBKEQ14164 716 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 CLEC16AQ2KHT3 1053 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 DPH6Q7L8W6 267 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 KIAA1328Q86T90 577 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 TTC39CQ8N584 583 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 URGCPQ8TCY9 931 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 DDX27Q96GQ7 796 aaKnown RBP13.86□□□□□ -0.19
COL4A1-202ENST00000467182 SENP8Q96LD8 212 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 C16orf45Q96MC5 204 aaPredicted RBP13.86□□□□□ -0.19
COL4A1-202ENST00000467182 IRX2Q9BZI1 471 aaPredicted RBP13.86□□□□□ -0.19
COL4A1-202ENST00000467182 SALL4Q9UJQ4 1053 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 INTUQ9ULD6 942 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 PCDHGC3Q9UN70 934 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 DUSP10Q9Y6W6 482 aa13.86□□□□□ -0.19
COL4A1-202ENST00000467182 BTNL10A8MVZ5 291 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 F8W810 466 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 TMEM189-UBE2V1I3L0A0 370 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 GABRDO14764 452 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 THAP12O43422 761 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 ITGB1P05556 798 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 GALCP54803 685 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 NOMO3P69849 1222 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 PTPN14Q15678 1187 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 TIGD5Q53EQ6 642 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 C16orf59Q7L2K0 433 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 PDCL2Q8N4E4 241 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 TMEM199Q8N511 208 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 KANSL3Q9P2N6 904 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 DNAJB4Q9UDY4 337 aa13.85□□□□□ -0.19
COL4A1-202ENST00000467182 ABHD14A-ACY1A0A1B0GW23 586 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 TMCO5BA8MYB1 307 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 M0QZQ0 153 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 CYB561D2O14569 222 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 HOXA2O43364 376 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 RTN2O75298 545 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 KIF4AO95239 1232 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 H2AFZP0C0S5 128 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 TMEM253P0C7T8 217 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 VDRP11473 427 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 LMO2P25791 158 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 SSTR3P32745 418 aaPredicted RBP13.84□□□□□ -0.19
COL4A1-202ENST00000467182 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
COL4A1-202ENST00000467182 BRCC3P46736 316 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 CENPCQ03188 943 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 KIF5AQ12840 1032 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 ARHGAP29Q52LW3 1261 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 WSCD1Q658N2 575 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 ACAD10Q6JQN1 1059 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 DCLRE1AQ6PJP8 1040 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 H2AFVQ71UI9 128 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 ADGRF2Q8IZF7 708 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 CRYBG2Q8N1P7 616 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 WDTC1Q8N5D0 677 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 APPL2Q8NEU8 664 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 ARHGEF26Q96DR7 871 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 CYFIP2Q96F07 1278 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 NT5C1AQ9BXI3 368 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 TSGA10Q9BZW7 698 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 DPEP3Q9H4B8 488 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 NRDE2Q9H7Z3 1164 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
COL4A1-202ENST00000467182 IL23AQ9NPF7 189 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 SEPT11Q9NVA2 429 aaKnown RBP13.84□□□□□ -0.19
COL4A1-202ENST00000467182 HCSTQ9UBK5 93 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 LRFN2Q9ULH4 789 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 GUCA1BQ9UMX6 200 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 NCANO14594 1321 aa13.84□□□□□ -0.19
COL4A1-202ENST00000467182 FAM170AA1A519 330 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 ANKRD62A6NC57 917 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 O00370 1275 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 KRT86O43790 486 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 HUS1O60921 280 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 DGKIO75912 1065 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 B3GAT3O94766 335 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 FTLP02792 175 aaPredicted RBP13.83□□□□□ -0.2
COL4A1-202ENST00000467182 PFKMP08237 780 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 ACRP10323 421 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 PAX3P23760 479 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 DEFB103AP81534 67 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 PTP4A2Q12974 167 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 PAN2Q504Q3 1202 aaKnown RBP13.83□□□□□ -0.2
COL4A1-202ENST00000467182 KIAA0319Q5VV43 1072 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 DENND1BQ6P3S1 775 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 TRIM72Q6ZMU5 477 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms