RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 HEATR9A2RTY3 570 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 NDUFB5O43674 189 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 DGAT1O75907 488 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 TRIM16O95361 564 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 DARSP14868 501 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 ETFBP38117 255 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 GCLCP48506 637 aaPredicted RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 ALDH18A1P54886 795 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 CDH18Q13634 790 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 SGSM1Q2NKQ1 1148 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 KRT78Q8N1N4 520 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 TNIP2Q8NFZ5 429 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 UCMAQ8WVF2 138 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 SEPT1Q8WYJ6 367 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 COLEC11Q9BWP8 271 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 ZCWPW1Q9H0M4 648 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 PKD2L2Q9NZM6 624 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 KIF13AQ9H1H9 1805 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 PXDNQ92626 1479 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 C2CD2LO14523 706 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 NCK2O43639 380 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 FKBP9O95302 570 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 ODC1P11926 461 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 ALDH7A1P49419 539 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 KCNB1Q14721 858 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 EMC2Q15006 297 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
HPS4-209ENST00000466781 GOLGA7BQ2TAP0 167 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 FKBP9P1Q75LS8 142 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 ZNF438Q7Z4V0 828 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 ADCK1Q86TW2 530 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 BBS7Q8IWZ6 715 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 RFFLQ8WZ73 363 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 OSBPL9Q96SU4 736 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 TSC22D3Q99576 134 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 WWP1Q9H0M0 922 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
HPS4-209ENST00000466781 ANO9A1A5B4 782 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 PRR23AA6NEV1 266 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 RNASEH1O60930 286 aaKnown RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 SEC24DO94855 1032 aaPredicted RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 APOA4P06727 396 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 MYL2P10916 166 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 VCLP18206 1134 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 CHSY1Q86X52 802 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 ATP6V0D2Q8N8Y2 350 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 SLITRK1Q96PX8 696 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 DMAP1Q9NPF5 467 aaPredicted RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 MPP6Q9NZW5 540 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 STOML1Q9UBI4 398 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 RASSF10A6NK89 507 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 MAP3K13O43283 966 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 CYTH3O43739 400 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 C6orf10Q5SRN2 563 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 ARHGEF26Q96DR7 871 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 ZDHHC15Q96MV8 337 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.1□□□□□ -0.95
HPS4-209ENST00000466781 CRLS1Q9UJA2 301 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 CAB39Q9Y376 341 aaPredicted RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 ALOX15P16050 662 aaPredicted RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 SCP2P22307 547 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 CXCL9Q07325 125 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 UGT3A1Q6NUS8 523 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 CNPY4Q8N129 248 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 SCFD2Q8WU76 684 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 PRMT6Q96LA8 375 aaPredicted RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 TASP1Q9H6P5 420 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 C20orf96Q9NUD7 363 aaPredicted RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 CDYLQ9Y232 598 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 TTLL13PA6NNM8 815 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 RGL2O15211 777 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 NPTXRO95502 500 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 PDGFRAP16234 1089 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 NCOA4Q13772 614 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 CEP55Q53EZ4 464 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 SYCP2LQ5T4T6 812 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 ATF7IP2Q5U623 682 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 NFRKBQ6P4R8 1299 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.1□□□□□ -0.95
HPS4-209ENST00000466781 NT5DC4Q86YG4 428 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 PLD3Q8IV08 490 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 BRD8Q9H0E9 1235 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 XPO7Q9UIA9 1087 aaKnown RBP9.1□□□□□ -0.95
HPS4-209ENST00000466781 SLC39A10Q9ULF5 831 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 ATP11BQ9Y2G3 1177 aa9.1□□□□□ -0.95
HPS4-209ENST00000466781 RRN3P2A6NIE6 340 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 ACADMP11310 421 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 CYP2C9P11712 490 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 CAP2P40123 477 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 GUCA1AP43080 201 aaPredicted RBP9.09□□□□□ -0.95
HPS4-209ENST00000466781 HIC1Q14526 733 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 NOTUMQ6P988 496 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 SRBD1Q8N5C6 995 aaKnown RBP9.09□□□□□ -0.95
HPS4-209ENST00000466781 MCEEQ96PE7 176 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 COPS7BQ9H9Q2 264 aaPredicted RBP9.09□□□□□ -0.95
HPS4-209ENST00000466781 A0A1B0GW55 424 aa9.09□□□□□ -0.95
HPS4-209ENST00000466781 DUX4L2P0CJ85 424 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms