RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 TPSD1Q9BZJ3 242 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 BRD9Q9H8M2 597 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 CFAP97Q9P2B7 532 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 ATP8A1Q9Y2Q0 1164 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 PCDHGA9Q9Y5G4 932 aaKnown RBP5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 PCDHGA8Q9Y5G5 932 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 PCDHGA7Q9Y5G6 932 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 PCDHGA6Q9Y5G7 932 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 PCDHGA3Q9Y5H0 932 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 WDR91A4D1P6 747 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 LINC01548A6NM66 108 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 F2RL2O00254 374 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 MYBL2P10244 700 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 NR2F6P10588 404 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 MALP21145 153 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 CCT8P50990 548 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 EGFLAMQ63HQ2 1017 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 SLC30A10Q6XR72 485 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 RFKQ969G6 155 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 TEKT5Q96M29 485 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 VRK1Q99986 396 aaPredicted RBP5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 SIK2Q9H0K1 926 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 EHD3Q9NZN3 535 aa5.17□□□□□ -1.58
CHMP2B-202ENST00000466696 SHTN1A0MZ66 631 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 ZNF785A8K8V0 405 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 GJB1P08034 283 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 RHOP08100 348 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 ZFXP17010 805 aaPredicted RBP5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 LPOP22079 712 aaPredicted RBP5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 SMARCA1P28370 1054 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 GRM1Q13255 1194 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 SNAPC2Q13487 334 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 UAP1L1Q3KQV9 507 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 KHDC1Q4VXA5 237 aaKnown RBP5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 ZNF425Q6IV72 752 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 SLC4A10Q6U841 1118 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 CAMKK1Q8N5S9 505 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 FBXO41Q8TF61 875 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 FKBP10Q96AY3 582 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 CNPPD1Q9BV87 410 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 ACTRT3Q9BYD9 372 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 AMBRA1Q9C0C7 1298 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 SPC25Q9HBM1 224 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 TRHDEQ9UKU6 1024 aa5.16□□□□□ -1.58
CHMP2B-202ENST00000466696 KRTAP29-1A8MX34 341 aaPredicted RBP5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 FTH1P19P0C7X4 201 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 ITGALP20701 1170 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 DRD4P21917 467 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 PSMC1P62191 440 aaKnown RBP5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 BMPR2Q13873 1038 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 HABP2Q14520 560 aaPredicted RBP5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 ABCB5Q2M3G0 1257 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 SEMA4CQ9C0C4 833 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 GPR35Q9HC97 309 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 SERTAD4Q9NUC0 356 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 POLHQ9Y253 713 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF804BA4D1E1 1349 aa5.15□□□□□ -1.59
CHMP2B-202ENST00000466696 TARM1B6A8C7 271 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 NT5C1B-RDH14C9J2C7 533 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 PROB1E7EW31 1015 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 NXPH3O95157 252 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 ARIH2O95376 493 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 HNRNPCP07910 306 aaKnown RBP eCLIP5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 EBLN1P0CF75 366 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF135P52742 658 aaPredicted RBP5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 ADKP55263 362 aaKnown RBP5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 DSC2Q02487 901 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 TFF2Q03403 129 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 ITKQ08881 620 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 EFCAB2Q5VUJ9 269 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 ZNF551Q7Z340 670 aaPredicted RBP5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 VGLL2Q8N8G2 317 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 C3orf20Q8ND61 904 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 PSD4Q8NDX1 1056 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 FAM136AQ96C01 138 aa5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.14□□□□□ -1.59
CHMP2B-202ENST00000466696 FZD9O00144 591 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 RARBP10826 455 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 NDUFB7P17568 137 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 CD6P30203 668 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 PIK3CGP48736 1102 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 FXR1P51114 621 aaKnown RBP eCLIP5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 GUCY2FP51841 1108 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 EIF2B5Q13144 721 aaKnown RBP5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 MTMR1Q13613 665 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 PCBP2Q15366 365 aaKnown RBP eCLIP5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 TBCCQ15814 346 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 MTX3Q5HYI7 312 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 RBM20Q5T481 1227 aaKnown RBP5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 TEDDM1Q5T9Z0 273 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 TAF2Q6P1X5 1199 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 CEP85Q6P2H3 762 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 PNMA8AQ86V59 439 aaPredicted RBP5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 Q8N9P0 234 aaPredicted RBP5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 ATRIPQ8WXE1 791 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 SMOC2Q9H3U7 446 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 SERPINB13Q9UIV8 391 aa5.13□□□□□ -1.59
CHMP2B-202ENST00000466696 GABRDO14764 452 aa5.12□□□□□ -1.59
CHMP2B-202ENST00000466696 JTBO76095 146 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms