RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ZNF623O75123 536 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 SOAT2O75908 522 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 INMTO95050 263 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 FOSP01100 380 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 TXNP10599 105 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 TYRP1P17643 537 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 ABCB4P21439 1286 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 PTTG1IPP53801 180 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 UCP3P55916 312 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 SLFN5Q08AF3 891 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 ZNF844Q08AG5 666 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 PDCD2Q16342 344 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 FAM102AQ5T9C2 384 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 AGAP9Q5VTM2 703 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 C1QL3Q5VWW1 255 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 TSHZ3Q63HK5 1081 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 Q6ZSN1 163 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 LCNL1Q6ZST4 164 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 UNC13DQ70J99 1090 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 LIMS2Q7Z4I7 341 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 GAS2L3Q86XJ1 694 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 SYT12Q8IV01 421 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 LIX1LQ8IVB5 337 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 YAF2Q8IY57 180 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 MB21D1Q8N884 522 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 PDPRQ8NCN5 879 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 POF1BQ8WVV4 589 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 EDAQ92838 391 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 SPSB4Q96A44 273 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 KIAA1191Q96A73 305 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 SMOQ99835 787 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 VKORC1Q9BQB6 163 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 ATP11BQ9Y2G3 1177 aa5.27□□□□□ -1.57
CDC42BPA-211ENST00000466538 E7ENX8 843 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 PRSS23O95084 383 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 KIF20AO95235 890 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 ITGB3P05106 788 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 EEF1GP26641 437 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 IL6STP40189 918 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 HSPA7P48741 367 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 MAN2A2P49641 1150 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 MAPK10P53779 464 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 SATB1Q01826 763 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 NHLH2Q02577 135 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 TAP2Q03519 686 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 IQCB1Q15051 598 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 INO80DQ53TQ3 878 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 KLHDC7AQ5VTJ3 777 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 TXLNBQ8N3L3 684 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 MPP5Q8N3R9 675 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 VGLL2Q8N8G2 317 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 FAM46DQ8NEK8 389 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 OR56A3Q8NH54 315 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 Q8TCH9 128 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 ZNF566Q969W8 418 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 MARS2Q96GW9 593 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 PHACTR3Q96KR7 559 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 RBM15Q96T37 977 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 HEPHQ9BQS7 1158 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 CRB3Q9BUF7 120 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 GPR87Q9BY21 358 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 DHX36Q9H2U1 1008 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 RNPEPQ9H4A4 650 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 PPCSQ9HAB8 311 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 TM7SF3Q9NS93 570 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 AURKAIP1Q9NWT8 199 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 ETAA1Q9NY74 926 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 CAPN11Q9UMQ6 739 aa5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDC42BPA-211ENST00000466538 CCDC195A0A1B0GUA6 201 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 hCG_1642624A0A1W2PR95 340 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 POLRMTO00411 1230 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 FFAR2O15552 330 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 CCP110O43303 1012 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 CREB3O43889 395 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 PRICKLE3O43900 615 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 RECQL4O94761 1208 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 ATXN1LP0C7T5 689 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 SPATA31D3P0C874 917 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 HARSP12081 509 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 FCER1AP12319 257 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 BTF3P20290 206 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 ACO1P21399 889 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 IL1R2P27930 398 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 HIBADHP31937 336 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 TRAPPC10P48553 1259 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 CARSP49589 748 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 ICA1Q05084 483 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 FSTL1Q12841 308 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 PMS2P11Q13670 270 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 INSCQ1MX18 579 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 MPEG1Q2M385 716 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 DCAF12L1Q5VU92 463 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 FOXR2Q6PJQ5 311 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 SPATA31D4Q6ZUB0 917 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 KRT28Q7Z3Y7 464 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 FANCBQ8NB91 859 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 CYP2W1Q8TAV3 490 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 POC1BQ8TC44 478 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms