RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SLC39A12Q504Y0 691 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 STXBP5Q5T5C0 1151 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 CRELD2Q6UXH1 353 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-206ENST00000466532 DNAJB7Q7Z6W7 309 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-206ENST00000466532 METTL23Q86XA0 190 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 EFCAB13Q8IY85 973 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 PSMG2Q969U7 264 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 DNAJC19Q96DA6 116 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 PYM1Q9BRP8 204 aaKnown RBP20.71■□□□□ 0.91
COL9A3-206ENST00000466532 HSFX1Q9UBD0 423 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 EXOC7Q9UPT5 735 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 PIAS3Q9Y6X2 628 aa20.71■□□□□ 0.91
COL9A3-206ENST00000466532 KCNA1Q09470 495 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 ITIH5Q86UX2 942 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 YAF2Q8IY57 180 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 THEM5Q8N1Q8 247 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 FAM3CQ92520 227 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 RSPRY1Q96DX4 576 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 SEPT5Q99719 369 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-206ENST00000466532 STRA6Q9BX79 667 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 ZCWPW1Q9H0M4 648 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 ATXN3LQ9H3M9 355 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 OTOGLQ3ZCN5 2332 aa20.7■□□□□ 0.9
COL9A3-206ENST00000466532 TULP1O00294 542 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-206ENST00000466532 IL18RAPO95256 599 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 GCNT3O95395 438 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 FGF19O95750 216 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 GABRR2P28476 465 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 ID4P47928 161 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 TUFMP49411 452 aaKnown RBP20.69■□□□□ 0.9
COL9A3-206ENST00000466532 CDR1P51861 262 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 MGAT5BQ3V5L5 792 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 L1TD1Q5T7N2 865 aaKnown RBP20.69■□□□□ 0.9
COL9A3-206ENST00000466532 CCDC73Q6ZRK6 1079 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 GAREM2Q75VX8 874 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 NT5DC4Q86YG4 428 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 GPIHBP1Q8IV16 184 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 ZNF687Q8N1G0 1237 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 FAM200AQ8TCP9 573 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 CSGALNACT1Q8TDX6 532 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 RUBCNQ92622 972 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 ACCSQ96QU6 501 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 LPIN3Q9BQK8 851 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 FAM213AQ9BRX8 229 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 PCDHGA2Q9Y5H1 932 aa20.69■□□□□ 0.9
COL9A3-206ENST00000466532 ARNTLO00327 626 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 IDEP14735 1019 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 STAT6P42226 847 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 MTAPQ13126 283 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 VEPH1Q14D04 833 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 SV2CQ496J9 727 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 WSCD1Q658N2 575 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 TSSK4Q6SA08 328 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 ARID3BQ8IVW6 561 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-206ENST00000466532 KIAA2013Q8IYS2 634 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 SUMF1Q8NBK3 374 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 ATRIPQ8WXE1 791 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 BORCS6Q96GS4 357 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 ZNF560Q96MR9 790 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 USP28Q96RU2 1077 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 MKNK1Q9BUB5 465 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 PANK2Q9BZ23 570 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 CHRDQ9H2X0 955 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 PRMT8Q9NR22 394 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-206ENST00000466532 ZSCAN32Q9NX65 697 aa20.68■□□□□ 0.9
COL9A3-206ENST00000466532 DMXL1Q9Y485 3027 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 DCHS1Q96JQ0 3298 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 KPNA7A9QM74 516 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 CHADO15335 359 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 ATF6P18850 670 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 CASP5P51878 434 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 FCHO2Q0JRZ9 810 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 ARHGAP15Q53QZ3 475 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 GPR158Q5T848 1215 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 SYCP3Q8IZU3 236 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 DCLK2Q8N568 766 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 ZBTB44Q8NCP5 570 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 ZSWIM2Q8NEG5 633 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 C2orf15Q8WU43 125 aaKnown RBP20.67■□□□□ 0.9
COL9A3-206ENST00000466532 SAAL1Q96ER3 474 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 INTS4Q96HW7 963 aaKnown RBP20.67■□□□□ 0.9
COL9A3-206ENST00000466532 LMAN1LQ9HAT1 526 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 OLFML3Q9NRN5 406 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 FOXD4L1Q9NU39 408 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 MTMR6Q9Y217 621 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 PCDHB13Q9Y5F0 798 aa20.67■□□□□ 0.9
COL9A3-206ENST00000466532 DPYSL4O14531 572 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 CCNE1P24864 410 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 WNT7BP56706 349 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 TFAMQ00059 246 aaKnown RBP20.66■□□□□ 0.9
COL9A3-206ENST00000466532 FOXK2Q01167 660 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 SMARCB1Q12824 385 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 SLC39A14Q15043 492 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 LRRTM3Q86VH5 581 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 BRSK2Q8IWQ3 736 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 SPPL2BQ8TCT7 592 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 NELL1Q92832 810 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 GCNAQ96QF7 691 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 PANK4Q9NVE7 773 aa20.66■□□□□ 0.9
COL9A3-206ENST00000466532 MORC2Q9Y6X9 1032 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms