RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 TMEM86AQ8N2M4 240 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 HASPINQ8TF76 798 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 RABGGTAQ92696 567 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 BADQ92934 168 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 ELOVL4Q9GZR5 314 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 HMGXB4Q9UGU5 601 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 NAGPAQ9UK23 515 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 DSEQ9UL01 958 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 PRG3Q9Y2Y8 225 aaPredicted RBP12.93□□□□□ -0.34
VPS16-206ENST00000466415 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
VPS16-206ENST00000466415 MICAL3Q7RTP6 2002 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 KRT86O43790 486 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 ZNF500O60304 480 aaPredicted RBP12.92□□□□□ -0.34
VPS16-206ENST00000466415 DDHD2O94830 711 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 KIF4AO95239 1232 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 CALCAP01258 141 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 FGBP02675 491 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 FAM163BP0C2L3 166 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 VDRP11473 427 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 WARSP23381 471 aaKnown RBP12.92□□□□□ -0.34
VPS16-206ENST00000466415 GNL1P36915 607 aaPredicted RBP12.92□□□□□ -0.34
VPS16-206ENST00000466415 RAD23BP54727 409 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 FMO1Q01740 532 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 SOWAHAQ2M3V2 549 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 SGO2Q562F6 1265 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 SPOUT1Q5T280 376 aaKnown RBP12.92□□□□□ -0.34
VPS16-206ENST00000466415 PPP1R2P3Q6NXS1 205 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 OTOP2Q7RTS6 562 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 COLGALT2Q8IYK4 626 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 SLC4A11Q8NBS3 891 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 C3orf58Q8NDZ4 430 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 HEXIM2Q96MH2 286 aaKnown RBP12.92□□□□□ -0.34
VPS16-206ENST00000466415 LBHD1Q9BQE6 289 aaPredicted RBP12.92□□□□□ -0.34
VPS16-206ENST00000466415 TMEM175Q9BSA9 504 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 SYT11Q9BT88 431 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 COLEC11Q9BWP8 271 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 LZTFL1Q9NQ48 299 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 KIAA1257Q9ULG3 409 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
VPS16-206ENST00000466415 ATP8B3O60423 1300 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 CCDC85CA6NKD9 419 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 TMEM189-UBE2V1I3L0A0 370 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 ZNF263O14978 683 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 TADA2AO75478 443 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 H2AFZP0C0S5 128 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 SYN1P17600 705 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 CHRNB2P17787 502 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 BRCC3P46736 316 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 LHX1P48742 406 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS16-206ENST00000466415 DEFB103AP81534 67 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 STILQ15468 1287 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 CLEC16AQ2KHT3 1053 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 TIGD5Q53EQ6 642 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 WSCD1Q658N2 575 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 FAM117BQ6P1L5 589 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 H2AFVQ71UI9 128 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 PASD1Q8IV76 773 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 REXO1L1PQ8IX06 675 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 SLC30A5Q8TAD4 765 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 SPATA18Q8TC71 538 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 KBTBD7Q8WVZ9 684 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 ZNF606Q8WXB4 792 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 CTNNBL1Q8WYA6 563 aaPredicted RBP12.91□□□□□ -0.34
VPS16-206ENST00000466415 DDX1Q92499 740 aaKnown RBP12.91□□□□□ -0.34
VPS16-206ENST00000466415 DPF3Q92784 378 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 VWCEQ96DN2 955 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 TWNKQ96RR1 684 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 MTIF3Q9H2K0 278 aaKnown RBP12.91□□□□□ -0.34
VPS16-206ENST00000466415 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 ZMYND8Q9ULU4 1186 aaPredicted RBP12.91□□□□□ -0.34
VPS16-206ENST00000466415 FAN1Q9Y2M0 1017 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
VPS16-206ENST00000466415 ALPK3Q96L96 1907 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 I3L4J1 428 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 M0QYV0 167 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 NRP1O14786 923 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 KIF5CO60282 957 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 B4GALT3O60512 393 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 RTN2O75298 545 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 DGKIO75912 1065 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 LSM8O95777 96 aaKnown RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 ALDH2P05091 517 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 PDGFRBP09619 1106 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 GZMAP12544 262 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 SSTR3P32745 418 aaPredicted RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 NSFP46459 744 aaKnown RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 NAP1L1P55209 391 aaKnown RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 PTPN14Q15678 1187 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms