RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 CYP39A1Q9NYL5 469 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 NEDD4P46934 1319 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 HECTD3Q5T447 861 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 GET4Q7L5D6 327 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-205ENST00000465950 TBC1D10CQ8IV04 446 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 MFN1Q8IWA4 741 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 ULK4Q96C45 1275 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 CCDC3Q9BQI4 270 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 PLEKHA4Q9H4M7 779 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 NSUN3Q9H649 340 aaKnown RBP9.95□□□□□ -0.82
SCAF11-205ENST00000465950 WDR41Q9HAD4 459 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 STOML1Q9UBI4 398 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 SQORQ9Y6N5 450 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 FAM95CA0A1B0GW59 222 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 PFKFB1P16118 471 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 ANXA11P50995 505 aaKnown RBP9.95□□□□□ -0.82
SCAF11-205ENST00000465950 TAS2R42Q7RTR8 314 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 MB21D2Q8IYB1 491 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-205ENST00000465950 TTC30BQ8N4P2 665 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 WFIKKN2Q8TEU8 576 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 SPIRE2Q8WWL2 714 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 ZMYND12Q9H0C1 365 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-205ENST00000465950 GUCA1BQ9UMX6 200 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 SYN3O14994 580 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 CLCN3P51790 818 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 TPGS2Q68CL5 300 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 MYLK4Q86YV6 388 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-205ENST00000465950 PRDM16Q9HAZ2 1276 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 BFARQ9NZS9 450 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 MAFFQ9ULX9 164 aa9.95□□□□□ -0.82
SCAF11-205ENST00000465950 ZFP37Q9Y6Q3 630 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-205ENST00000465950 ATF2P15336 505 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 SHMT1P34896 483 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 TM4SF4P48230 202 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 STX1BP61266 288 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 ERVK-21P61565 698 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 NME3Q13232 169 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 LONRF2Q1L5Z9 754 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 KCNB2Q92953 911 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 KIAA1143Q96AT1 154 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 C18orf8Q96DM3 657 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 MTMR9Q96QG7 549 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 BAG1Q99933 345 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 SYT15Q9BQS2 421 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 KLHL11Q9NVR0 708 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 DEC1Q9P2X7 70 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 BARX2Q9UMQ3 279 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 ACKR2O00590 384 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 PODXLO00592 558 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 HNRNPH1P31943 449 aaKnown RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 CASP6P55212 293 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 STAT4Q14765 748 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 CALML6Q8TD86 181 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 CXorf40AQ8TE69 158 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 TMA16Q96EY4 203 aaKnown RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 OTUB1Q96FW1 271 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 RWDD2AQ9UIY3 292 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 VPS28Q9UK41 221 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 ERVW-1Q9UQF0 538 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 ZSCAN5CA6NGD5 496 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 KIF3CO14782 793 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 VDRP11473 427 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 ITGB6P18564 788 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 NCAPHQ15003 741 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 PDGFRLQ15198 375 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 TTC19Q6DKK2 380 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 FRMD5Q7Z6J6 570 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 OR8D1Q8WZ84 308 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 HERVK_113Q902F9 699 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 C8orf33Q9H7E9 229 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 TMEM161AQ9NX61 479 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 CEP104O60308 925 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 PSMA3P25788 255 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 PLCL1Q15111 1095 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 RARS2Q5T160 578 aaKnown RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 FAM102AQ5T9C2 384 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 TSC1Q92574 1164 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 RPRD1AQ96P16 312 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 C2orf49Q9BVC5 232 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 NUSAP1Q9BXS6 441 aaKnown RBP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 STRADBQ9C0K7 418 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 KDM4CQ9H3R0 1056 aa9.94□□□□□ -0.82
SCAF11-205ENST00000465950 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.94□□□□□ -0.82
SCAF11-205ENST00000465950 CFAP69A5D8W1 941 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 GOLGA8TH3BQL2 631 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 TMX2-CTNND1H3BSU7 103 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 QSOX1O00391 747 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 GCATO75600 419 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 LCP1P13796 627 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 KRT20P35900 424 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 ATP5C1P36542 298 aaKnown RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 NPEPPSP55786 919 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 LAMTOR4Q0VGL1 99 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 MYBPC2Q14324 1141 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 CCDC85BQ15834 202 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 RAPH1Q70E73 1250 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 CARNMT1Q8N4J0 409 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms