RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DCXO43602 365 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 N4BP1O75113 896 aaKnown RBP13.86□□□□□ -0.19
COL5A1-206ENST00000465877 AKAP3O75969 853 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 RPL13P26373 211 aaKnown RBP13.86□□□□□ -0.19
COL5A1-206ENST00000465877 AP3M2P53677 418 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 DLG4P78352 724 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 CLDN10P78369 228 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 GPR17Q13304 367 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 OTOP3Q7RTS5 596 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 GRASPQ7Z6J2 395 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-206ENST00000465877 FAM186BQ8IYM0 893 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 ADSSL1Q8N142 457 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 THEM5Q8N1Q8 247 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 TMEM86AQ8N2M4 240 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 TOP6BLQ8N6T0 577 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 SPATA18Q8TC71 538 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 ZNF516Q92618 1163 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 ACSF2Q96CM8 615 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-206ENST00000465877 IPO9Q96P70 1041 aaKnown RBP13.86□□□□□ -0.19
COL5A1-206ENST00000465877 TSG101Q99816 390 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 ZCWPW1Q9H0M4 648 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 CRISPLD1Q9H336 500 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 HCFC1R1Q9NWW0 138 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 MAFFQ9ULX9 164 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 MYO16Q9Y6X6 1858 aa13.86□□□□□ -0.19
COL5A1-206ENST00000465877 MYH10P35580 1976 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 KMT2EQ8IZD2 1858 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 TRIM49BA6NDI0 452 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 CLSTN1O94985 981 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 TRIM49P0CI25 452 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 TRIM49CP0CI26 452 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 NTHL1P78549 312 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 MYL7Q01449 175 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 TSPY1Q01534 308 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 LRRC63Q05C16 580 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 TWF1Q12792 350 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 TRPC3Q13507 836 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 STIM1Q13586 685 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 PABPC1LQ4VXU2 614 aaKnown RBP13.85□□□□□ -0.19
COL5A1-206ENST00000465877 SLC39A12Q504Y0 691 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 CENPPQ6IPU0 288 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 CLEC17AQ6ZS10 378 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 INTS8Q75QN2 995 aaKnown RBP13.85□□□□□ -0.19
COL5A1-206ENST00000465877 OSTM1Q86WC4 334 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 ZDHHC14Q8IZN3 488 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
COL5A1-206ENST00000465877 DDX43Q9NXZ2 648 aaKnown RBP13.85□□□□□ -0.19
COL5A1-206ENST00000465877 HELZP42694 1942 aaKnown RBP13.85□□□□□ -0.19
COL5A1-206ENST00000465877 ZNF638Q14966 1978 aaKnown RBP13.85□□□□□ -0.19
COL5A1-206ENST00000465877 PSMA7O14818 248 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 PHACTR2O75167 634 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 STAU1O95793 577 aaKnown RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 KRT13P13646 458 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 FSHRP23945 695 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 ACAT1P24752 427 aaKnown RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 GBP2P32456 591 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 PSMC2P35998 433 aaKnown RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 PPP1R2P41236 205 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 VAMP7P51809 220 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 PMS1P54277 932 aaKnown RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 TNNC1P63316 161 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 PLD1Q13393 1074 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 ADAM9Q13443 819 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 MORC3Q14149 939 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 SOWAHAQ2M3V2 549 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 ZNF699Q32M78 642 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 INTS6LQ5JSJ4 861 aaKnown RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 C1orf220Q5T0J3 134 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 ISM2Q6H9L7 571 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 ELMOD1Q8N336 334 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 TTC9BQ8N6N2 239 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 KBTBD7Q8WVZ9 684 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 EEF2KMTQ96G04 330 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 MYADMQ96S97 322 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 MKNK1Q9BUB5 465 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 DNMT3BQ9UBC3 853 aaKnown RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 KIF26AQ9ULI4 1882 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-206ENST00000465877 COL4A2P08572 1712 aa13.84□□□□□ -0.19
COL5A1-206ENST00000465877 TECTAO75443 2155 aa13.83□□□□□ -0.19
COL5A1-206ENST00000465877 PI4K2BG5E9Z4 385 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 BIN1O00499 593 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 GABRDO14764 452 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 CETN3O15182 167 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 SLC16A3O15427 465 aaKnown RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 HCRTO43612 131 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 VNN1O95497 513 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 CST3P01034 146 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ASGR2P07307 311 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 RHOP08100 348 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 EPB41P11171 864 aaKnown RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ALADP13716 330 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 BMP6P22004 513 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 CCNE1P24864 410 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ATICP31939 592 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms