RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 DMTF1Q9Y222 760 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 CEP83Q9Y592 693 aa3.86□□□□□ -1.79
SNX4-202ENST00000465505 COL3A1P02461 1466 aaPredicted RBP3.86□□□□□ -1.79
SNX4-202ENST00000465505 TCRBV7S2A1N4TA0A589 114 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 PABPN1LA6NDY0 278 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 VGLL3A8MV65 326 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 IPO5O00410 1097 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 PROP1O75360 226 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 GPR32O75388 356 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 S100BP04271 92 aaPredicted RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 ALAS1P13196 640 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 OSMP13725 252 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 DDCP20711 480 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 PAX7P23759 505 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 PSMA3P25788 255 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 TMPRSS15P98073 1019 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 DMTNQ08495 405 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 SLFN5Q08AF3 891 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 GEN1Q17RS7 908 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 TMEM95Q3KNT9 176 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 ALDH1L2Q3SY69 923 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 DACT2Q5SW24 774 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 L1TD1Q5T7N2 865 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 KIAA0895LQ68EN5 471 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 SP5Q6BEB4 398 aaPredicted RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 GLCCI1Q86VQ1 547 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 NGDNQ8NEJ9 315 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 CCDC47Q96A33 483 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 NAF1Q96HR8 494 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 SLC2A13Q96QE2 648 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 LRRC27Q9C0I9 530 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 ZNF700Q9H0M5 742 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 ALDH8A1Q9H2A2 487 aaPredicted RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 TMX1Q9H3N1 280 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 CCM2LQ9NUG4 571 aaPredicted RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 SLC17A6Q9P2U8 582 aa3.85□□□□□ -1.79
SNX4-202ENST00000465505 RUVBL1Q9Y265 456 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 THRAP3Q9Y2W1 955 aaKnown RBP3.85□□□□□ -1.79
SNX4-202ENST00000465505 CDHR4A6H8M9 788 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 FAM171A2A8MVW0 826 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 KIF3BO15066 747 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 PRKD3O94806 890 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 LDHAP00338 332 aaKnown RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 HNRNPCP07910 306 aaKnown RBP eCLIP3.84□□□□□ -1.79
SNX4-202ENST00000465505 PDGFRBP09619 1106 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 CCDC159P0C7I6 412 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 FOLR3P41439 243 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 ERVK-21P61565 698 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 WASHC5Q12768 1159 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 SIM2Q14190 667 aaPredicted RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 SF3B3Q15393 1217 aaKnown RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 PAPD7Q5XG87 772 aaKnown RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 PDXDC1Q6P996 788 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 SRRM1Q8IYB3 904 aaKnown RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 ACRBPQ8NEB7 543 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 TBC1D15Q8TC07 691 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 SSH3Q8TE77 659 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 GIMAP1Q8WWP7 306 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 DPF2Q92785 391 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 CDHR1Q96JP9 859 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 SLX1AQ9BQ83 275 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 ZHX3Q9H4I2 956 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 WDR26Q9H7D7 661 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 ZNF277Q9NRM2 450 aaPredicted RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 IL17RBQ9NRM6 502 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 VSX1Q9NZR4 365 aaPredicted RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 STK26Q9P289 416 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 ARPP21Q9UBL0 812 aaPredicted RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 PGAP2Q9UHJ9 254 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 ASAP1Q9ULH1 1129 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 G3BP2Q9UN86 482 aaKnown RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 DNM3Q9UQ16 869 aa3.84□□□□□ -1.79
SNX4-202ENST00000465505 MYBBP1AQ9BQG0 1328 aaKnown RBP3.84□□□□□ -1.79
SNX4-202ENST00000465505 CCDC180Q9P1Z9 1646 aa3.84□□□□□ -1.8
SNX4-202ENST00000465505 KIAA0391O15091 583 aaKnown RBP3.83□□□□□ -1.8
SNX4-202ENST00000465505 GPR39O43194 453 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 HTATSF1O43719 755 aaKnown RBP3.83□□□□□ -1.8
SNX4-202ENST00000465505 PEX1O43933 1283 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 TPPPO94811 219 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 IPO7O95373 1038 aaKnown RBP3.83□□□□□ -1.8
SNX4-202ENST00000465505 SRGNP10124 158 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 FCER1AP12319 257 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 AGXTP21549 392 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 SLC6A4P31645 630 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 TSPAN7P41732 249 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 CASP2P42575 452 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 RAPGEF1Q13905 1077 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 VWA1Q6PCB0 445 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 UBE2Q1Q7Z7E8 422 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 IQCF2Q8IXL9 164 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 CHPFQ8IZ52 775 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 NDUFAF2Q8N183 169 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 DCBLD1Q8N8Z6 715 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 NLGN4YQ8NFZ3 816 aaPredicted RBP3.83□□□□□ -1.8
SNX4-202ENST00000465505 WDR66Q8TBY9 1149 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 ERP27Q96DN0 273 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 SERINC2Q96SA4 455 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 TIMP4Q99727 224 aa3.83□□□□□ -1.8
SNX4-202ENST00000465505 C7orf25Q9BPX7 421 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms