RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 THADAQ6YHU6 1953 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 DMXL2Q8TDJ6 3036 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 JAK2O60674 1132 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 HIP1RO75146 1068 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 SOAT2O75908 522 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 LARGE1O95461 756 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 CXCL8P10145 99 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 LRPAP1P30533 357 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 SPAG1Q07617 926 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 ZNF252P-AS1Q0IIN9 211 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 GRSF1Q12849 480 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRA2B-208ENST00000465245 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-208ENST00000465245 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRA2B-208ENST00000465245 ELF2Q15723 593 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 PLK5Q496M5 336 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 TMEM196Q5HYL7 178 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 DSTYKQ6XUX3 929 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 ITIH5Q86UX2 942 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 DAW1Q8N136 415 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 ATAD1Q8NBU5 361 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 DRC1Q96MC2 740 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 GCNAQ96QF7 691 aa13.09□□□□□ -0.31
TRA2B-208ENST00000465245 SMG9Q9H0W8 520 aaKnown RBP13.09□□□□□ -0.31
TRA2B-208ENST00000465245 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
TRA2B-208ENST00000465245 GIPC1O14908 333 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 SLC16A4O15374 487 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 RNF40O75150 1001 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 TOM1L1O75674 476 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 WEE1P30291 646 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 CDC25CP30307 473 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRA2B-208ENST00000465245 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 CREB5Q02930 508 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 FOXC1Q12948 553 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 STRN3Q13033 797 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 MYBPC2Q14324 1141 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 VEPH1Q14D04 833 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 ME3Q16798 604 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 OVOS1Q6IE37 1185 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 FSTL4Q6MZW2 842 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 ARMCX5Q6P1M9 558 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 CAMKK1Q8N5S9 505 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 HHIPQ96QV1 700 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 SEPT5Q99719 369 aaPredicted RBP13.08□□□□□ -0.32
TRA2B-208ENST00000465245 LPIN3Q9BQK8 851 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 DUSP15Q9H1R2 295 aaPredicted RBP13.08□□□□□ -0.32
TRA2B-208ENST00000465245 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 GKN1Q9NS71 199 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 LRWD1Q9UFC0 647 aa13.08□□□□□ -0.32
TRA2B-208ENST00000465245 PKD1L2Q7Z442 2459 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 E9PMD0 336 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 CLDN3O15551 220 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 RHOBTB1O94844 696 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 EGFP01133 1207 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-208ENST00000465245 MATR3P43243 847 aaKnown RBP eCLIP13.07□□□□□ -0.325e-10■■□□□ 12.8
TRA2B-208ENST00000465245 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRA2B-208ENST00000465245 RUNX3Q13761 415 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 KARSQ15046 597 aaKnown RBP13.07□□□□□ -0.32
TRA2B-208ENST00000465245 DAB2IPQ5VWQ8 1189 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 RUSC1Q9BVN2 902 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 HSFX1Q9UBD0 423 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 UBQLN1Q9UMX0 589 aaKnown RBP13.07□□□□□ -0.32
TRA2B-208ENST00000465245 ABCA7Q8IZY2 2146 aa13.07□□□□□ -0.32
TRA2B-208ENST00000465245 SCN1AP35498 2009 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 FASNP49327 2511 aaKnown RBP13.06□□□□□ -0.32
TRA2B-208ENST00000465245 TTC26A0AVF1 554 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 C4orf47A7E2U8 309 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 SFI1A8K8P3 1242 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 TRDMT1O14717 391 aaKnown RBP13.06□□□□□ -0.32
TRA2B-208ENST00000465245 XPOTO43592 962 aaKnown RBP13.06□□□□□ -0.32
TRA2B-208ENST00000465245 CAVIN2O95810 425 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 CLTAP09496 248 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 ODC1P11926 461 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 TYMPP19971 482 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 SPINK2P20155 84 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 CYP3A5P20815 502 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 TUFMP49411 452 aaKnown RBP13.06□□□□□ -0.32
TRA2B-208ENST00000465245 GUCY2FP51841 1108 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 PPP2R3AQ06190 1150 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 MCL1Q07820 350 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 MAPK7Q13164 816 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 TAF12Q16514 161 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 MGAT5BQ3V5L5 792 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 TTC38Q5R3I4 469 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 TRIM68Q6AZZ1 485 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 RINT1Q6NUQ1 792 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 CMTM8Q8IZV2 173 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-208ENST00000465245 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 ADAM33Q9BZ11 813 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 EBF3Q9H4W6 596 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 POLR3BQ9NW08 1133 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-208ENST00000465245 DNM3Q9UQ16 869 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms