RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 SLITRK6Q9H5Y7 841 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 SEMA4GQ9NTN9 838 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 BLOC1S4Q9NUP1 217 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 KCNG1Q9UIX4 513 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 CPSF3Q9UKF6 684 aaKnown RBP11.88□□□□□ -0.51
COL11A1-207ENST00000465209 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 SLC27A5Q9Y2P5 690 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 ASB3Q9Y575 518 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 SDK1Q7Z5N4 2213 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 ATG2BQ96BY7 2078 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 ANAPC1Q9H1A4 1944 aa11.88□□□□□ -0.51
COL11A1-207ENST00000465209 A0A0B4J269 797 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 PIRO00625 290 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
COL11A1-207ENST00000465209 KRT37O76014 449 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 NFICP08651 508 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 GABRR2P28476 465 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 HOXA6P31267 233 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 EPHB3P54753 998 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 LRRC32Q14392 662 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 RILPL1Q5EBL4 403 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 C9orf57Q5W0N0 161 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 JADE1Q6IE81 842 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 PKN3Q6P5Z2 889 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 PRR23CQ6ZRP0 262 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 PRR23BQ6ZRT6 265 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 LONP2Q86WA8 852 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 RALGPS2Q86X27 583 aaPredicted RBP11.87□□□□□ -0.51
COL11A1-207ENST00000465209 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 NETO1Q8TDF5 533 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 CSGALNACT1Q8TDX6 532 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 SENP8Q96LD8 212 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 TSPAN18Q96SJ8 248 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 PLIN2Q99541 437 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 LPIN3Q9BQK8 851 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 LARSQ9P2J5 1176 aaKnown RBP11.87□□□□□ -0.51
COL11A1-207ENST00000465209 TBX20Q9UMR3 447 aa11.87□□□□□ -0.51
COL11A1-207ENST00000465209 HELZP42694 1942 aaKnown RBP11.86□□□□□ -0.51
COL11A1-207ENST00000465209 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 H0YCG3 227 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 XPOTO43592 962 aaKnown RBP11.86□□□□□ -0.51
COL11A1-207ENST00000465209 GDF9O60383 454 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
COL11A1-207ENST00000465209 ODC1P11926 461 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 CNR2P34972 360 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 ALDH1A3P47895 512 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 LIG4P49917 911 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 CYP4F8P98187 520 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 TNK2Q07912 1038 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 SIM2Q14190 667 aaPredicted RBP11.86□□□□□ -0.51
COL11A1-207ENST00000465209 PON2Q15165 354 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 ZRSR1Q15695 479 aaKnown RBP11.86□□□□□ -0.51
COL11A1-207ENST00000465209 CSRP2Q16527 193 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 KYAT1Q16773 422 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 ARHGAP29Q52LW3 1261 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 DGKKQ5KSL6 1271 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 GPR158Q5T848 1215 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 ARL6IP4Q66PJ3 421 aaKnown RBP11.86□□□□□ -0.51
COL11A1-207ENST00000465209 DSTYKQ6XUX3 929 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 USP37Q86T82 979 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 TMEM150AQ86TG1 271 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 WDR5BQ86VZ2 330 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 CCSER1Q9C0I3 900 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 ZCWPW1Q9H0M4 648 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 ATXN3LQ9H3M9 355 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 RAB23Q9ULC3 237 aa11.86□□□□□ -0.51
COL11A1-207ENST00000465209 OTOL1A6NHN0 477 aaPredicted RBP11.85□□□□□ -0.51
COL11A1-207ENST00000465209 TISP43B9A030 160 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 K7ENM7 598 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 SLC26A4O43511 780 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 FGF19O95750 216 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 SCP2P22307 547 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 MATR3P43243 847 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL11A1-207ENST00000465209 KPNA1P52294 538 aaPredicted RBP11.85□□□□□ -0.51
COL11A1-207ENST00000465209 GTF2BQ00403 316 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 SLC39A12Q504Y0 691 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 LRRTM3Q86VH5 581 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 YAF2Q8IY57 180 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
COL11A1-207ENST00000465209 TTC8Q8TAM2 541 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 BPIFB1Q8TDL5 484 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 BICD1Q96G01 975 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 FAM83CQ9BQN1 747 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 SLC46A2Q9BY10 475 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 TASP1Q9H6P5 420 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 RPF1Q9H9Y2 349 aaKnown RBP11.85□□□□□ -0.51
COL11A1-207ENST00000465209 HPS4Q9NQG7 708 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 DERAQ9Y315 318 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 PTPRDP23468 1912 aa11.85□□□□□ -0.51
COL11A1-207ENST00000465209 SPEGQ15772 3267 aa11.84□□□□□ -0.51
COL11A1-207ENST00000465209 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.84□□□□□ -0.51
COL11A1-207ENST00000465209 ANKRD63C9JTQ0 380 aa11.84□□□□□ -0.51
COL11A1-207ENST00000465209 EXTL3O43909 919 aa11.84□□□□□ -0.51
COL11A1-207ENST00000465209 TADA3O75528 432 aa11.84□□□□□ -0.51
COL11A1-207ENST00000465209 HMGA1P17096 107 aaKnown RBP11.84□□□□□ -0.51
COL11A1-207ENST00000465209 PAX3P23760 479 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms