RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RDH13Q8NBN7 331 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 BEST2Q8NFU1 509 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 NKD2Q969F2 451 aaPredicted RBP18.81■□□□□ 0.6
CPSF4-209ENST00000465132 SRRTQ9BXP5 876 aaKnown RBP18.81■□□□□ 0.6
CPSF4-209ENST00000465132 IKZF4Q9H2S9 585 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 UBQLN1Q9UMX0 589 aaKnown RBP18.81■□□□□ 0.6
CPSF4-209ENST00000465132 CASTOR2A6NHX0 329 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 GOLGA6L19H0YKK7 550 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 TULP1O00294 542 aaPredicted RBP18.8■□□□□ 0.6
CPSF4-209ENST00000465132 KIF4AO95239 1232 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 TNNC2P02585 160 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 CYP3A5P20815 502 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 CYP24A1Q07973 514 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 TMEM132DQ14C87 1099 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 ANGPT1Q15389 498 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 DUOXA2Q1HG44 320 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 CRELD2Q6UXH1 353 aaPredicted RBP18.8■□□□□ 0.6
CPSF4-209ENST00000465132 GET4Q7L5D6 327 aaPredicted RBP18.8■□□□□ 0.6
CPSF4-209ENST00000465132 CBWD2Q8IUF1 395 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 WDR49Q8IV35 697 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 HASPINQ8TF76 798 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 KIF12Q96FN5 646 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 DDX27Q96GQ7 796 aaKnown RBP18.8■□□□□ 0.6
CPSF4-209ENST00000465132 ANKRD36BP1Q96IX9 119 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 CLSTN3Q9BQT9 956 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 TTPALQ9BTX7 342 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 FUCA2Q9BTY2 467 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 FBXW11Q9UKB1 542 aa18.8■□□□□ 0.6
CPSF4-209ENST00000465132 SMIM28A0A1B0GU29 152 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 LACTBL1A8MY62 500 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 ANHXE9PGG2 379 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 STK25O00506 426 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 TMEM191BP0C7N4 346 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 TNNI1P19237 187 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 EEF1GP26641 437 aaKnown RBP18.79■□□□□ 0.6
CPSF4-209ENST00000465132 TNFSF9P41273 254 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 PMS1P54277 932 aaKnown RBP18.79■□□□□ 0.6
CPSF4-209ENST00000465132 CETN1Q12798 172 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 BFSP1Q12934 665 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 HTR4Q13639 388 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 NAB2Q15742 525 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 SEZ6Q53EL9 994 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 FAM171A1Q5VUB5 890 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 LNX1Q8TBB1 728 aaPredicted RBP18.79■□□□□ 0.6
CPSF4-209ENST00000465132 PIK3R5Q8WYR1 880 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 DUSP9Q99956 384 aaKnown RBP18.79■□□□□ 0.6
CPSF4-209ENST00000465132 CXCL16Q9H2A7 254 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 CA14Q9ULX7 337 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 NFE2L3Q9Y4A8 694 aa18.79■□□□□ 0.6
CPSF4-209ENST00000465132 PDCD11Q14690 1871 aaKnown RBP18.78■□□□□ 0.6
CPSF4-209ENST00000465132 AKAP3O75969 853 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 RFX1P22670 979 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 GTF2H1P32780 548 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
CPSF4-209ENST00000465132 VAMP7P51809 220 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 MARSP56192 900 aaKnown RBP18.78■□□□□ 0.6
CPSF4-209ENST00000465132 PSMD5Q16401 504 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 C11orf57Q6ZUT1 292 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-209ENST00000465132 CEP57Q86XR8 500 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 FAM200AQ8TCP9 573 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 CCDC127Q96BQ5 260 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 CGRRF1Q99675 332 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 TBC1D17Q9HA65 648 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 ZFP37Q9Y6Q3 630 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-209ENST00000465132 TRIP11Q15643 1979 aa18.78■□□□□ 0.6
CPSF4-209ENST00000465132 PTPRZ1P23471 2315 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-209ENST00000465132 MTCL1Q9Y4B5 1905 aaKnown RBP18.77■□□□□ 0.6
CPSF4-209ENST00000465132 HNRNPA1P09651 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
CPSF4-209ENST00000465132 DLATP10515 647 aaKnown RBP18.77■□□□□ 0.6
CPSF4-209ENST00000465132 CDK11BP21127 795 aaKnown RBP18.77■□□□□ 0.6
CPSF4-209ENST00000465132 FSHRP23945 695 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 ELAVL2Q12926 359 aaKnown RBP18.77■□□□□ 0.6
CPSF4-209ENST00000465132 LIN9Q5TKA1 542 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 GPR152Q8TDT2 470 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 PARD3BQ8TEW8 1205 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 PPP1R10Q96QC0 940 aaKnown RBP18.77■□□□□ 0.6
CPSF4-209ENST00000465132 PDE11AQ9HCR9 933 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 SLC2A4RGQ9NR83 387 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 ITGA11Q9UKX5 1188 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 NUMBLQ9Y6R0 609 aa18.77■□□□□ 0.6
CPSF4-209ENST00000465132 DMDP11532 3685 aa18.77■□□□□ 0.59
CPSF4-209ENST00000465132 DOCK8Q8NF50 2099 aa18.77■□□□□ 0.59
CPSF4-209ENST00000465132 ANK1P16157 1881 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 ARHGEF37A1IGU5 675 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 ADAM12O43184 909 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 PNPLA4P41247 253 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 MTIF2P46199 727 aaKnown RBP18.76■□□□□ 0.59
CPSF4-209ENST00000465132 CASP4P49662 377 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 TFAMQ00059 246 aaKnown RBP18.76■□□□□ 0.59
CPSF4-209ENST00000465132 PPM1LQ5SGD2 360 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 ZBTB41Q5SVQ8 909 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 TCERG1LQ5VWI1 586 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 JADE1Q6IE81 842 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 PHLDB3Q6NSJ2 640 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 GRASPQ7Z6J2 395 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-209ENST00000465132 CREBRFQ8IUR6 639 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 CCDC150Q8NCX0 1101 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 ST13P5Q8NFI4 369 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-209ENST00000465132 ARHGEF3Q9NR81 526 aa18.76■□□□□ 0.59
CPSF4-209ENST00000465132 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms