RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 RTL10Q7L3V2 364 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 SLC44A3Q8N4M1 653 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 FBXL6Q8N531 539 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 FLCNQ8NFG4 579 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 OR10T2Q8NGX3 314 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 SEPT5Q99719 369 aaPredicted RBP13.13□□□□□ -0.31
XRN1-204ENST00000465074 KXD1Q9BQD3 176 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 CEP72Q9P209 647 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 YIPF1Q9Y548 306 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 SNX9Q9Y5X1 595 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
XRN1-204ENST00000465074 PHACTR2O75167 634 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 PAPLNO95428 1278 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 VNN2O95498 520 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 CYP11A1P05108 521 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 GJA1P17302 382 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 CEBPBP17676 345 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 ACAT1P24752 427 aaKnown RBP13.12□□□□□ -0.31
XRN1-204ENST00000465074 CYP24A1Q07973 514 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 MYO1EQ12965 1108 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 MYBPC2Q14324 1141 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 SLC5A9Q2M3M2 681 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 MGAT5BQ3V5L5 792 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 CENPPQ6IPU0 288 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 PARM1Q6UWI2 310 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 TTC9BQ8N6N2 239 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 KIAA0895Q8NCT3 520 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 FGF14Q92915 247 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 TCEAL4Q96EI5 215 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 HPDLQ96IR7 371 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 MMS19Q96T76 1030 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
XRN1-204ENST00000465074 CRISPLD1Q9H336 500 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 ABI2Q9NYB9 513 aaPredicted RBP13.12□□□□□ -0.31
XRN1-204ENST00000465074 CA14Q9ULX7 337 aa13.12□□□□□ -0.31
XRN1-204ENST00000465074 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
XRN1-204ENST00000465074 MTMR11A4FU01 709 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 ZNF197O14709 1029 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 CASP4P49662 377 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
XRN1-204ENST00000465074 TSPY1Q01534 308 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 PLD1Q13393 1074 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 HTR4Q13639 388 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 PSMD6Q15008 389 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 TAF12Q16514 161 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 BMT2Q1RMZ1 405 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 CEP135Q66GS9 1140 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 MTSS1LQ765P7 747 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 GPIHBP1Q8IV16 184 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 WDR49Q8IV35 697 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 NPAS3Q8IXF0 933 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 SIX5Q8N196 739 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 LRRC52Q8N7C0 313 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 GOLGA5Q8TBA6 731 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 BORCS6Q96GS4 357 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 RTP3Q9BQQ7 232 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 ZCWPW1Q9H0M4 648 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 SLITRK6Q9H5Y7 841 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 ASAH2Q9NR71 780 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 DDX43Q9NXZ2 648 aaKnown RBP13.11□□□□□ -0.31
XRN1-204ENST00000465074 CGNQ9P2M7 1197 aaKnown RBP13.11□□□□□ -0.31
XRN1-204ENST00000465074 SIX4Q9UIU6 781 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 MAFFQ9ULX9 164 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 L1RE1Q9UN81 338 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 DUSP12Q9UNI6 340 aa13.11□□□□□ -0.31
XRN1-204ENST00000465074 FAM237AA0A1B0GTK4 181 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 MYL1P05976 194 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 POU2F2P09086 479 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 VCPP55072 806 aaKnown RBP13.1□□□□□ -0.31
XRN1-204ENST00000465074 MYL7Q01449 175 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 DPYDQ12882 1025 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 BIRC3Q13489 604 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 TRPC3Q13507 836 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 PNOCQ13519 176 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 TRAPPC11Q7Z392 1133 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 LRRTM3Q86VH5 581 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 DCP1BQ8IZD4 617 aaKnown RBP13.1□□□□□ -0.31
XRN1-204ENST00000465074 ADGRF2Q8IZF7 708 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 GPR152Q8TDT2 470 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 NXPE3Q969Y0 559 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 FAM122AQ96E09 287 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 LPIN3Q9BQK8 851 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 PI4K2AQ9BTU6 479 aa13.1□□□□□ -0.31
XRN1-204ENST00000465074 A0A1W2PRU2 124 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 ANHXE9PGG2 379 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 HCRTO43612 131 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 CALUO43852 315 aaPredicted RBP13.09□□□□□ -0.31
XRN1-204ENST00000465074 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
XRN1-204ENST00000465074 CST3P01034 146 aaPredicted RBP13.09□□□□□ -0.31
XRN1-204ENST00000465074 NR3C1P04150 777 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 PDGFRBP09619 1106 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 SRFP11831 508 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 CCR2P41597 374 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms