RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 ATXN3LQ9H3M9 355 aa24.52■■□□□ 1.52
USP4-208ENST00000464168 RBM12Q9NTZ6 932 aaKnown RBP24.52■■□□□ 1.52
USP4-208ENST00000464168 HSFX1Q9UBD0 423 aa24.52■■□□□ 1.52
USP4-208ENST00000464168 ANO9A1A5B4 782 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 TRAK2O60296 914 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 CYP11A1P05108 521 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 GABRR2P28476 465 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 MCM6Q14566 821 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 C1orf228Q6PIY5 440 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 TXNDC11Q6PKC3 985 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 RAB23Q9ULC3 237 aa24.51■■□□□ 1.51
USP4-208ENST00000464168 MYBPHLA2RUH7 354 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 ANKRD63C9JTQ0 380 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 SPECC1L-ADORA2AF8WAN1 911 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 FGF19O95750 216 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 GTF2BQ00403 316 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 DMWDQ09019 674 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 LRRC32Q14392 662 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 TMEM132DQ14C87 1099 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 GPR158Q5T848 1215 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 LAIR1Q6GTX8 287 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 ITIH5Q86UX2 942 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 TTC8Q8TAM2 541 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 ZFYVE19Q96K21 471 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 OBP2AQ9NY56 170 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 GTSE1Q9NYZ3 720 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 CDV3Q9UKY7 258 aaKnown RBP24.5■■□□□ 1.51
USP4-208ENST00000464168 DERAQ9Y315 318 aa24.5■■□□□ 1.51
USP4-208ENST00000464168 DPYSL4O14531 572 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 HRO43593 1189 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 PLCG1P19174 1290 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 WEE1P30291 646 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 NMT1P30419 496 aaKnown RBP24.49■■□□□ 1.51
USP4-208ENST00000464168 CTHP32929 405 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 ACOT2P49753 483 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 CDR1P51861 262 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 GRIN1Q05586 938 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 SPEM2Q0P670 501 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 SLC39A12Q504Y0 691 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 ARHGAP29Q52LW3 1261 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 Q6ZS52 159 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 RALGPS2Q86X27 583 aaPredicted RBP24.49■■□□□ 1.51
USP4-208ENST00000464168 RAD54LQ92698 747 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 LPIN3Q9BQK8 851 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 ZCWPW1Q9H0M4 648 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 ZHX3Q9H4I2 956 aa24.49■■□□□ 1.51
USP4-208ENST00000464168 CHURC1-FNTBB4DL54 471 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 TISP43B9A030 160 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 K7ESF4 209 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 PAPSS2O95340 614 aaPredicted RBP24.48■■□□□ 1.51
USP4-208ENST00000464168 CD2BP2O95400 341 aaKnown RBP24.48■■□□□ 1.51
USP4-208ENST00000464168 PRAMEF12O95522 483 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 KRT18P05783 430 aaKnown RBP24.48■■□□□ 1.51
USP4-208ENST00000464168 FNTBP49356 437 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 TUFMP49411 452 aaKnown RBP24.48■■□□□ 1.51
USP4-208ENST00000464168 KARSQ15046 597 aaKnown RBP24.48■■□□□ 1.51
USP4-208ENST00000464168 ARHGAP15Q53QZ3 475 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 SEPT5Q99719 369 aaPredicted RBP24.48■■□□□ 1.51
USP4-208ENST00000464168 ASB7Q9H672 318 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 TASP1Q9H6P5 420 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 IL21Q9HBE4 155 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 C2orf42Q9NWW7 574 aa24.48■■□□□ 1.51
USP4-208ENST00000464168 CACNA1BQ00975 2339 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 RETP07949 1114 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 ATF6P18850 670 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 SIM2Q14190 667 aaPredicted RBP24.47■■□□□ 1.51
USP4-208ENST00000464168 ZC2HC1CQ53FD0 456 aaPredicted RBP24.47■■□□□ 1.51
USP4-208ENST00000464168 DGKKQ5KSL6 1271 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 PRR23BQ6ZRT6 265 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 RTKNQ9BST9 563 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 DSEQ9UL01 958 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 C2CD2Q9Y426 696 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 STYXL1Q9Y6J8 313 aa24.47■■□□□ 1.51
USP4-208ENST00000464168 DCDC2BA2VCK2 349 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 CYB561D2O14569 222 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 TBCAO75347 108 aaKnown RBP24.46■■□□□ 1.51
USP4-208ENST00000464168 ABCD1P33897 745 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 LONP1P36776 959 aaKnown RBP24.46■■□□□ 1.51
USP4-208ENST00000464168 CYP4F8P98187 520 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 TNK2Q07912 1038 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 SRSF5Q13243 272 aaKnown RBP24.46■■□□□ 1.51
USP4-208ENST00000464168 PON2Q15165 354 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 MGAT5BQ3V5L5 792 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 ADALQ6DHV7 355 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 LRRTM3Q86VH5 581 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 FAM200AQ8TCP9 573 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 BPIFB1Q8TDL5 484 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 DPP3Q9NY33 737 aa24.46■■□□□ 1.51
USP4-208ENST00000464168 CHD8Q9HCK8 2581 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 HOXC13P31276 330 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 CCINQ13939 588 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 VEPH1Q14D04 833 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 WSCD1Q658N2 575 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 LONP2Q86WA8 852 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 METTL23Q86XA0 190 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 PYM1Q9BRP8 204 aaKnown RBP24.45■■□□□ 1.5
USP4-208ENST00000464168 SLC46A2Q9BY10 475 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 IKZF4Q9H2S9 585 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 ST6GALNAC4Q9H4F1 302 aa24.45■■□□□ 1.5
USP4-208ENST00000464168 AGO2Q9UKV8 859 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms