RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ZNF560Q96MR9 790 aa13.97□□□□□ -0.17
XRN1-203ENST00000463916 CORO1BQ9BR76 489 aa13.97□□□□□ -0.17
XRN1-203ENST00000463916 ZCWPW1Q9H0M4 648 aa13.97□□□□□ -0.17
XRN1-203ENST00000463916 CGNQ9P2M7 1197 aaKnown RBP13.97□□□□□ -0.17
XRN1-203ENST00000463916 DSEQ9UL01 958 aa13.97□□□□□ -0.17
XRN1-203ENST00000463916 CDH7Q9ULB5 785 aa13.97□□□□□ -0.17
XRN1-203ENST00000463916 NARSO43776 548 aaKnown RBP13.96□□□□□ -0.17
XRN1-203ENST00000463916 EXOC3O60645 756 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 PTPN2P17706 415 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 BFSP1Q12934 665 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 TDGQ13569 410 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 SURF1Q15526 300 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 SLC39A12Q504Y0 691 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 PARM1Q6UWI2 310 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 NPAS3Q8IXF0 933 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 UBALD2Q8IYN6 164 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 SLC44A3Q8N4M1 653 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.17
XRN1-203ENST00000463916 FGF14Q92915 247 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 PBXIP1Q96AQ6 731 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 DNAJC25Q9H1X3 360 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 GDAP2Q9NXN4 497 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 MAFFQ9ULX9 164 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 YIPF1Q9Y548 306 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.17
XRN1-203ENST00000463916 ANHXE9PGG2 379 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 HCRTO43612 131 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 TNNI1P19237 187 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 HTR4Q13639 388 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 SOWAHAQ2M3V2 549 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 PRSS36Q5K4E3 855 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 BMP8AQ7Z5Y6 402 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 METTL23Q86XA0 190 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 TMEM174Q8WUU8 243 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 TMLHEQ9NVH6 421 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 IGSF9Q9P2J2 1179 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 MRPS23Q9Y3D9 190 aaKnown RBP13.95□□□□□ -0.18
XRN1-203ENST00000463916 GOLGA6L4A6NEF3 574 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 PDXKO00764 312 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 TNNC2P02585 160 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 CEBPBP17676 345 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 KCNB1Q14721 858 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 CCDC142Q17RM4 750 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 OSTM1Q86WC4 334 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 SLC9A9Q8IVB4 645 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 SMYD4Q8IYR2 804 aaPredicted RBP13.95□□□□□ -0.18
XRN1-203ENST00000463916 GOLGA5Q8TBA6 731 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 CGRRF1Q99675 332 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 AVENQ9NQS1 362 aaPredicted RBP13.95□□□□□ -0.18
XRN1-203ENST00000463916 NUMBLQ9Y6R0 609 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 ZDBF2Q9HCK1 2354 aa13.95□□□□□ -0.18
XRN1-203ENST00000463916 HUS1O60921 280 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 GADD45BO75293 160 aaPredicted RBP13.94□□□□□ -0.18
XRN1-203ENST00000463916 MOSPD3O75425 235 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 NR3C1P04150 777 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 ACAT1P24752 427 aaKnown RBP13.94□□□□□ -0.18
XRN1-203ENST00000463916 DLG4P78352 724 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 FAM160A1Q05DH4 1040 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 LIMS2Q7Z4I7 341 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 THEM5Q8N1Q8 247 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 PARD3BQ8TEW8 1205 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 MCRS1Q96EZ8 462 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 ZNF512Q96ME7 567 aaPredicted RBP13.94□□□□□ -0.18
XRN1-203ENST00000463916 LRRC3Q9BY71 257 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 GJA1P17302 382 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 DDX43Q9NXZ2 648 aaKnown RBP13.94□□□□□ -0.18
XRN1-203ENST00000463916 DUSP12Q9UNI6 340 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 TRAF3IP3Q9Y228 551 aa13.94□□□□□ -0.18
XRN1-203ENST00000463916 ZFP37Q9Y6Q3 630 aaPredicted RBP13.94□□□□□ -0.18
XRN1-203ENST00000463916 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
XRN1-203ENST00000463916 GABRDO14764 452 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 CLDN10P78369 228 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
XRN1-203ENST00000463916 KBTBD7Q8WVZ9 684 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 ELMO3Q96BJ8 720 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 ZSWIM3Q96MP5 696 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 PKMYT1Q99640 499 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 ZNF318Q5VUA4 2279 aa13.93□□□□□ -0.18
XRN1-203ENST00000463916 PRPF40AO75400 957 aaKnown RBP13.92□□□□□ -0.18
XRN1-203ENST00000463916 MYL4P12829 197 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 ATF6P18850 670 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 LMO2P25791 158 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 ALDH1A3P47895 512 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 EPHA5P54756 1037 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 TDRD10Q5VZ19 366 aaKnown RBP13.92□□□□□ -0.18
XRN1-203ENST00000463916 IQCEQ6IPM2 695 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 PDZD4Q76G19 769 aaPredicted RBP13.92□□□□□ -0.18
XRN1-203ENST00000463916 TMC8Q8IU68 726 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 ADGRF2Q8IZF7 708 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 TMEM86AQ8N2M4 240 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 ELMOD1Q8N336 334 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 TOP6BLQ8N6T0 577 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 NXPE3Q969Y0 559 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 CCDC47Q96A33 483 aaKnown RBP13.92□□□□□ -0.18
XRN1-203ENST00000463916 EEF2KMTQ96G04 330 aa13.92□□□□□ -0.18
XRN1-203ENST00000463916 SEPT5Q99719 369 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms