RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 UBXN6Q9BZV1 441 aa7.9□□□□□ -1.14
EPHA4-210ENST00000463446 LMAN2LQ9H0V9 348 aa7.9□□□□□ -1.14
EPHA4-210ENST00000463446 LHX5Q9H2C1 402 aa7.9□□□□□ -1.14
EPHA4-210ENST00000463446 NLRC4Q9NPP4 1024 aa7.9□□□□□ -1.14
EPHA4-210ENST00000463446 MRPL17Q9NRX2 175 aaKnown RBP7.9□□□□□ -1.14
EPHA4-210ENST00000463446 CISHQ9NSE2 258 aa7.9□□□□□ -1.14
EPHA4-210ENST00000463446 ABHD10Q9NUJ1 306 aa7.9□□□□□ -1.14
EPHA4-210ENST00000463446 MIOSQ9NXC5 875 aa7.9□□□□□ -1.14
EPHA4-210ENST00000463446 CASTOR2A6NHX0 329 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 F8VZ95 297 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 FOXN3O00409 490 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-210ENST00000463446 GABRDO14764 452 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 MFAP3LO75121 409 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 DDHD2O94830 711 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 LSM8O95777 96 aaKnown RBP7.89□□□□□ -1.15
EPHA4-210ENST00000463446 ACADSBP45954 432 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TUFMP49411 452 aaKnown RBP7.89□□□□□ -1.15
EPHA4-210ENST00000463446 ADKP55263 362 aaKnown RBP7.89□□□□□ -1.15
EPHA4-210ENST00000463446 JAM2P57087 298 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 LRMPQ12912 555 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 NAB2Q15742 525 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 PTPROQ16827 1216 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 SOWAHAQ2M3V2 549 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TPGS2Q68CL5 300 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 LMBRD2Q68DH5 695 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-210ENST00000463446 IQCEQ6IPM2 695 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 ZNF280DQ6N043 979 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TMEM270Q6UE05 265 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 LIMS2Q7Z4I7 341 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 ZNF280BQ86YH2 543 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 ADGRF2Q8IZF7 708 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TDHQ8IZJ6 230 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TMEM35BQ8NCS4 154 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 CXorf38Q8TB03 319 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 STK32AQ8WU08 396 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 FUBP3Q96I24 572 aaKnown RBP eCLIP7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TGS1Q96RS0 853 aaKnown RBP7.89□□□□□ -1.15
EPHA4-210ENST00000463446 GDF15Q99988 308 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 NCAPGQ9BPX3 1015 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 EMILIN2Q9BXX0 1053 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 SLC28A3Q9HAS3 691 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 CYLDQ9NQC7 956 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 COMMD8Q9NX08 183 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 FNIP2Q9P278 1114 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TUBGCP4Q9UGJ1 667 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 INTUQ9ULD6 942 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 STXBP5LQ9Y2K9 1186 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 BACE2Q9Y5Z0 518 aa7.89□□□□□ -1.15
EPHA4-210ENST00000463446 TMEM265A0A087WTH1 108 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 LRRC53A6NM62 1247 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 C5orf67F2Z3F1 127 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 NCK2O43639 380 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 CILPO75339 1184 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 NOL4O94818 638 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 SOD2P04179 222 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 GYPCP04921 128 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 URODP06132 367 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 WEE2P0C1S8 567 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 SETSIPP0DME0 302 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 MYBL1P10243 752 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 SKILP12757 684 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 PTPN1P18031 435 aaKnown RBP7.88□□□□□ -1.15
EPHA4-210ENST00000463446 GNA15P30679 374 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 ELF1P32519 619 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 SMAD3P84022 425 aaKnown RBP7.88□□□□□ -1.15
EPHA4-210ENST00000463446 CDR2Q01850 454 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 TIGD5Q53EQ6 642 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 TDRD12Q587J7 1177 aaKnown RBP7.88□□□□□ -1.15
EPHA4-210ENST00000463446 FAM171A1Q5VUB5 890 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 IRF2BP2Q7Z5L9 587 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 ZDHHC17Q8IUH5 632 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 COLGALT1Q8NBJ5 622 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 FBXO22Q8NEZ5 403 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 ZNF606Q8WXB4 792 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 CYFIP2Q96F07 1278 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 AGPAT1Q99943 283 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 PI4K2AQ9BTU6 479 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.88□□□□□ -1.15
EPHA4-210ENST00000463446 OSBPL7Q9BZF2 842 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 TSGA10Q9BZW7 698 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 TTYH3Q9C0H2 523 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 GANQ9H2C0 597 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 CWH43Q9H720 699 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 MRPL47Q9HD33 250 aaKnown RBP7.88□□□□□ -1.15
EPHA4-210ENST00000463446 ABCB6Q9NP58 842 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 SIX2Q9NPC8 291 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 DDX43Q9NXZ2 648 aaKnown RBP7.88□□□□□ -1.15
EPHA4-210ENST00000463446 WDR35Q9P2L0 1181 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 STRIP2Q9ULQ0 834 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 PCDHGC3Q9UN70 934 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 FHOD1Q9Y613 1164 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 TTC3P53804 2025 aa7.88□□□□□ -1.15
EPHA4-210ENST00000463446 PTPRJQ12913 1337 aa7.87□□□□□ -1.15
EPHA4-210ENST00000463446 CITO14578 2027 aa7.87□□□□□ -1.15
EPHA4-210ENST00000463446 ANKRD62A6NC57 917 aa7.87□□□□□ -1.15
EPHA4-210ENST00000463446 MEIS3P2A8K0S8 358 aa7.87□□□□□ -1.15
EPHA4-210ENST00000463446 EIF3CLB5ME19 914 aaKnown RBP7.87□□□□□ -1.15
EPHA4-210ENST00000463446 SART1O43290 800 aaKnown RBP7.87□□□□□ -1.15
EPHA4-210ENST00000463446 KRT86O43790 486 aa7.87□□□□□ -1.15
EPHA4-210ENST00000463446 CD19P15391 556 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms