RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 MTSS1LQ765P7 747 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 RSAD2Q8WXG1 361 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 CCDC127Q96BQ5 260 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 FAM84AQ96KN4 292 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 CGRRF1Q99675 332 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 ZCWPW1Q9H0M4 648 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 SMOC2Q9H3U7 446 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 GDAP2Q9NXN4 497 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 HSFX1Q9UBD0 423 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 DUSP12Q9UNI6 340 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 PTPRJQ12913 1337 aa17.47■□□□□ 0.39
COL1A1-202ENST00000463440 PDXKO00764 312 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 VNN2O95498 520 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 EPHB3P54753 998 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 TSPY1Q01534 308 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 HTR4Q13639 388 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 KCNB1Q14721 858 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 SLC39A12Q504Y0 691 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 CYP4A22Q5TCH4 519 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 PDZD4Q76G19 769 aaPredicted RBP17.46■□□□□ 0.39
COL1A1-202ENST00000463440 SLC9A9Q8IVB4 645 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 NPAS3Q8IXF0 933 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 DCP1BQ8IZD4 617 aaKnown RBP17.46■□□□□ 0.39
COL1A1-202ENST00000463440 TMEM86AQ8N2M4 240 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 PDCL2Q8N4E4 241 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 SLC44A3Q8N4M1 653 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 FBXL6Q8N531 539 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 ATAD1Q8NBU5 361 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 LEMD2Q8NC56 503 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 SPATA18Q8TC71 538 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 C2orf15Q8WU43 125 aaKnown RBP17.46■□□□□ 0.39
COL1A1-202ENST00000463440 ING5Q8WYH8 240 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 HPDLQ96IR7 371 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 RTP3Q9BQQ7 232 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 KCTD10Q9H3F6 313 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 GDE1Q9NZC3 331 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 CEP72Q9P209 647 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 RAPGEFL1Q9UHV5 662 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 L1RE1Q9UN81 338 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 SNX9Q9Y5X1 595 aa17.46■□□□□ 0.39
COL1A1-202ENST00000463440 NOTCH4Q99466 2003 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 MICAL2O94851 1124 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 TUFMP49411 452 aaKnown RBP17.45■□□□□ 0.38
COL1A1-202ENST00000463440 SLC5A9Q2M3M2 681 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 TRAPPC11Q7Z392 1133 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 FMR1NBQ8N0W7 255 aaPredicted RBP17.45■□□□□ 0.38
COL1A1-202ENST00000463440 TOP6BLQ8N6T0 577 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 TMEM174Q8WUU8 243 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 ASAH2Q9NR71 780 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 DMAC2Q9NW81 257 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 FBXL21Q9UKT6 434 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 SLC27A5Q9Y2P5 690 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 ARIH1Q9Y4X5 557 aaPredicted RBP17.45■□□□□ 0.38
COL1A1-202ENST00000463440 ASB3Q9Y575 518 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 NUMBLQ9Y6R0 609 aa17.45■□□□□ 0.38
COL1A1-202ENST00000463440 CALUO43852 315 aaPredicted RBP17.44■□□□□ 0.38
COL1A1-202ENST00000463440 NR3C1P04150 777 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 SRFP11831 508 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 LHX1P48742 406 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 MYL7Q01449 175 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 PRSS36Q5K4E3 855 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 SCARA3Q6AZY7 606 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 DPH6Q7L8W6 267 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 ADGRF2Q8IZF7 708 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 SPPL2BQ8TCT7 592 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 MCRS1Q96EZ8 462 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 ACBD6Q9BR61 282 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 MFSD1Q9H3U5 465 aa17.44■□□□□ 0.38
COL1A1-202ENST00000463440 DDX43Q9NXZ2 648 aaKnown RBP17.44■□□□□ 0.38
COL1A1-202ENST00000463440 CIZ1Q9ULV3 898 aaPredicted RBP17.44■□□□□ 0.38
COL1A1-202ENST00000463440 NARSO43776 548 aaKnown RBP17.43■□□□□ 0.38
COL1A1-202ENST00000463440 MYL4P12829 197 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 CEBPBP17676 345 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 PCSK1P29120 753 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 AP3M2P53677 418 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 EPHA5P54756 1037 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 FAM160A1Q05DH4 1040 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 TRPC3Q13507 836 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 NFE2Q16621 373 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-202ENST00000463440 MGAT5BQ3V5L5 792 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 PARM1Q6UWI2 310 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 ITIH5Q86UX2 942 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 LRRTM3Q86VH5 581 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 HS6ST3Q8IZP7 471 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 GUF1Q8N442 669 aaKnown RBP17.43■□□□□ 0.38
COL1A1-202ENST00000463440 TTC9BQ8N6N2 239 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 FGF14Q92915 247 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 TCEAL4Q96EI5 215 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 SEPT5Q99719 369 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-202ENST00000463440 TRAF3IP3Q9Y228 551 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 FRMD4BQ9Y2L6 1034 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 PCDHB5Q9Y5E4 795 aa17.43■□□□□ 0.38
COL1A1-202ENST00000463440 PHACTR2O75167 634 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 SNW1Q13573 536 aaKnown RBP17.42■□□□□ 0.38
COL1A1-202ENST00000463440 VEPH1Q14D04 833 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 SOWAHAQ2M3V2 549 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 ENGASEQ8NFI3 743 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 ST13P5Q8NFI4 369 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms