RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	TMEM150A	Q86TG1	271 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	GPIHBP1	Q8IV16	184 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	RIN3	Q8TB24	985 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	SECISBP2L	Q93073	1101 aa	Known RBP	12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	SENP8	Q96LD8	212 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	TSPAN18	Q96SJ8	248 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	LPIN3	Q9BQK8	851 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	GTSE1	Q9NYZ3	720 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	KCNG1	Q9UIX4	513 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	GMEB2	Q9UKD1	530 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	CDV3	Q9UKY7	258 aa	Known RBP	12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	ODF2L	Q9ULJ1	636 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	ASB3	Q9Y575	518 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	OBSL1	O75147	1896 aa		12.12	□□□□□ -0.47
PTPN7-204	ENST00000462815	VWA3A	A6NCI4	1184 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	SLC30A4	O14863	429 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	EPHB3	P54753	998 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	TNK2	Q07912	1038 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	PKN3	Q6P5Z2	889 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	C1orf228	Q6PIY5	440 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	LRRTM3	Q86VH5	581 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	LONP2	Q86WA8	852 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	RALGPS2	Q86X27	583 aa	Predicted RBP	12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	ZCWPW1	Q9H0M4	648 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	SLITRK6	Q9H5Y7	841 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	SEMA4G	Q9NTN9	838 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	LARS	Q9P2J5	1176 aa	Known RBP	12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	STYXL1	Q9Y6J8	313 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	CHD6	Q8TD26	2715 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	SCN1A	P35498	2009 aa		12.11	□□□□□ -0.47
PTPN7-204	ENST00000462815	DENND4C	Q5VZ89	1909 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	OTOL1	A6NHN0	477 aa	Predicted RBP	12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	TISP43	B9A030	160 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	ANKRD63	C9JTQ0	380 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815		H0YCG3	227 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	HNRNPDL	O14979	420 aa	Known RBP	12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	GDF9	O60383	454 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	EIF5B	O60841	1220 aa	Known RBP	12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	ODC1	P11926	461 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	GABRR2	P28476	465 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	CNR2	P34972	360 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	ALDH1A3	P47895	512 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	LIG4	P49917	911 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	CYP4F8	P98187	520 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	GTF2B	Q00403	316 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	GRIN1	Q05586	938 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	LRRC32	Q14392	662 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	PPP2R5D	Q14738	602 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	PON2	Q15165	354 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	ZRSR1	Q15695	479 aa	Known RBP	12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	CSRP2	Q16527	193 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	KYAT1	Q16773	422 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	C8orf34	Q49A92	452 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	ARHGAP29	Q52LW3	1261 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	DGKK	Q5KSL6	1271 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	GPR158	Q5T848	1215 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	DSTYK	Q6XUX3	929 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	PRR23C	Q6ZRP0	262 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	WDR5B	Q86VZ2	330 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	TTC8	Q8TAM2	541 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	NETO1	Q8TDF5	533 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	CSGALNACT1	Q8TDX6	532 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	SLC46A2	Q9BY10	475 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	CCSER1	Q9C0I3	900 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	IKZF4	Q9H2S9	585 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	ATXN3L	Q9H3M9	355 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	HPS4	Q9NQG7	708 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815	DERA	Q9Y315	318 aa		12.1	□□□□□ -0.47
PTPN7-204	ENST00000462815		K7ENM7	598 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	SLC26A4	O43511	780 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	XPOT	O43592	962 aa	Known RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	CD2BP2	O95400	341 aa	Known RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	FGF19	O95750	216 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	HMGA1	P17096	107 aa	Known RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	SCP2	P22307	547 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	PAX3	P23760	479 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	KPNA1	P52294	538 aa	Predicted RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	WNT7B	P56706	349 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	SIM2	Q14190	667 aa	Predicted RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	SLC39A12	Q504Y0	691 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	SCARA3	Q6AZY7	606 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	PRR23B	Q6ZRT6	265 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	USP37	Q86T82	979 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	GPBP1	Q86WP2	473 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	CD302	Q8IX05	232 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	YAF2	Q8IY57	180 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	EFCAB13	Q8IY85	973 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	FAM160A2	Q8N612	972 aa	Predicted RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	BPIFB1	Q8TDL5	484 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	BICD1	Q96G01	975 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	FAM83C	Q9BQN1	747 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	MSTO1	Q9BUK6	570 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	STRA6	Q9BX79	667 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	SMG9	Q9H0W8	520 aa	Known RBP	12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	ST6GALNAC4	Q9H4F1	302 aa		12.09	□□□□□ -0.47
PTPN7-204	ENST00000462815	TASP1	Q9H6P5	420 aa		12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms