RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PARP6Q2NL67 630 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 ZC2HC1CQ53FD0 456 aaPredicted RBP16.53■□□□□ 0.24
SMC4-204ENST00000462787 CROCCP3Q8IVE0 287 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 KAT2BQ92831 832 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 MCEEQ96PE7 176 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 MAD2L2Q9UI95 211 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 INPP5FQ9Y2H2 1132 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 CST8O60676 142 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 RBP3P10745 1247 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 PMLP29590 882 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 HNRNPH3P31942 346 aaKnown RBP16.53■□□□□ 0.24
SMC4-204ENST00000462787 GPC3P51654 580 aa16.53■□□□□ 0.24
SMC4-204ENST00000462787 DEPDC5O75140 1603 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 DRG2P55039 364 aaKnown RBP16.52■□□□□ 0.24
SMC4-204ENST00000462787 NCALDP61601 193 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 PLOD1Q02809 727 aaPredicted RBP16.52■□□□□ 0.24
SMC4-204ENST00000462787 IYDQ6PHW0 289 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 PLD3Q8IV08 490 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 COA1Q9GZY4 146 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 AGPAT3Q9NRZ7 376 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 REXO2Q9Y3B8 237 aaKnown RBP16.52■□□□□ 0.24
SMC4-204ENST00000462787 SLIT1O75093 1534 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
SMC4-204ENST00000462787 HMOX2P30519 316 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 STIP1P31948 543 aaKnown RBP16.52■□□□□ 0.24
SMC4-204ENST00000462787 B3GNT6Q6ZMB0 384 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 CATSPER3Q86XQ3 398 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 GDPD5Q8WTR4 605 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 OXNAD1Q96HP4 312 aaPredicted RBP16.52■□□□□ 0.24
SMC4-204ENST00000462787 NINJ2Q9NZG7 142 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 SOX13Q9UN79 622 aa16.52■□□□□ 0.24
SMC4-204ENST00000462787 ARHGEF37A1IGU5 675 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 AP3B1O00203 1094 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 PPIP5K2O43314 1243 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 TBC1D4O60343 1298 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 GLRA3O75311 464 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 SESN2P58004 480 aaPredicted RBP16.52■□□□□ 0.23
SMC4-204ENST00000462787 AUHQ13825 339 aaKnown RBP16.52■□□□□ 0.23
SMC4-204ENST00000462787 BNC2Q6ZN30 1099 aaPredicted RBP16.52■□□□□ 0.23
SMC4-204ENST00000462787 ZNF786Q8N393 782 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 FBXO36Q8NEA4 188 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 NR1H4Q96RI1 486 aaPredicted RBP16.52■□□□□ 0.23
SMC4-204ENST00000462787 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.23
SMC4-204ENST00000462787 ADGRB1O14514 1584 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 KCNQ4P56696 695 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 STX5Q13190 355 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 LPCAT2Q7L5N7 544 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.52■□□□□ 0.235e-13■■■■■ 220.5
SMC4-204ENST00000462787 SPATA18Q8TC71 538 aa16.52■□□□□ 0.23
SMC4-204ENST00000462787 SMIM31A0A1B0GVY4 71 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 CYP19A1P11511 503 aaPredicted RBP16.51■□□□□ 0.23
SMC4-204ENST00000462787 S100A5P33763 92 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 ZNF398Q8TD17 642 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 C8orf37Q96NL8 207 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 AKR1B1P15121 316 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 CDK16Q00536 496 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 ZNF75CPQ92670 426 aaPredicted RBP16.51■□□□□ 0.23
SMC4-204ENST00000462787 TBC1D10AQ9BXI6 508 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 AFF2P51816 1311 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 UGP2Q16851 508 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 PCNX4Q63HM2 1172 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 PARD3BQ8TEW8 1205 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 DHX35Q9H5Z1 703 aaKnown RBP16.51■□□□□ 0.23
SMC4-204ENST00000462787 EFCAB1Q9HAE3 211 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 FAM217BQ9NTX9 383 aaPredicted RBP16.51■□□□□ 0.23
SMC4-204ENST00000462787 PALM3A6NDB9 673 aaPredicted RBP16.51■□□□□ 0.23
SMC4-204ENST00000462787 TCN1P20061 433 aaPredicted RBP16.51■□□□□ 0.23
SMC4-204ENST00000462787 BGNP21810 368 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 MCL1Q07820 350 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 TMCO5AQ8N6Q1 288 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 WDR60Q8WVS4 1066 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 CELF1Q92879 486 aaKnown RBP16.51■□□□□ 0.23
SMC4-204ENST00000462787 PPP1R36Q96LQ0 422 aa16.51■□□□□ 0.23
SMC4-204ENST00000462787 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
SMC4-204ENST00000462787 F5H6K3 240 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 SLC37A4O43826 429 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 MMP13P45452 471 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 KLRC3Q07444 240 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 ACCSLQ4AC99 568 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 AASDHQ4L235 1098 aaPredicted RBP16.5■□□□□ 0.23
SMC4-204ENST00000462787 SLC27A3Q5K4L6 730 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 CWF19L1Q69YN2 538 aaKnown RBP16.5■□□□□ 0.23
SMC4-204ENST00000462787 OR9Q1Q8NGQ5 310 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.5■□□□□ 0.232e-13■■■■■ 56.3
SMC4-204ENST00000462787 CD209Q9NNX6 404 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 GH2P01242 217 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 ATXN3P54252 364 aaPredicted RBP16.5■□□□□ 0.23
SMC4-204ENST00000462787 DAB2P98082 770 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 MAPK6Q16659 721 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 QPCTQ16769 361 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 DUOXA2Q1HG44 320 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 KBTBD12Q3ZCT8 623 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 ZBTB41Q5SVQ8 909 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 MROH9Q5TGP6 573 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 EXD1Q8NHP7 514 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 SPATA20Q8TB22 786 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms