RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 JAG1P78504 1218 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 RESTQ13127 1097 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 TRIM29Q14134 588 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 SHROOM1Q2M3G4 852 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-204ENST00000462658 PRAMEF18Q5VWM3 479 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 C1QL4Q86Z23 238 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 APOBEC3FQ8IUX4 373 aaKnown RBP8.35□□□□□ -1.07
UBE4B-204ENST00000462658 HIPK4Q8NE63 616 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 TEPSINQ96N21 525 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 AIFM3Q96NN9 605 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 ADARB2Q9NS39 739 aaKnown RBP8.35□□□□□ -1.07
UBE4B-204ENST00000462658 ARHGAP20Q9P2F6 1191 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 ZFP69BQ9UJL9 534 aa8.35□□□□□ -1.07
UBE4B-204ENST00000462658 SIPA1L1O43166 1804 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 hCG_1642624A0A1W2PR95 340 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 KLRF2D3W0D1 207 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 TGM5O43548 720 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 TOMM70O94826 608 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 FKBP9O95302 570 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 MPIG6BO95866 241 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 IL18BPO95998 194 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 GOLGA8HP0CJ92 632 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 PDHBP11177 359 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 XBP1P17861 261 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 PTGS1P23219 599 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 KPNA1P52294 538 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-204ENST00000462658 MLLT6P55198 1093 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-204ENST00000462658 ICA1Q05084 483 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 DHCR24Q15392 516 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 KRT40Q6A162 431 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 FKBP9P1Q75LS8 142 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 SIAH1Q8IUQ4 282 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 AFAP1L2Q8N4X5 818 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 STPG3Q8N7X2 389 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 TP53I13Q8NBR0 393 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-204ENST00000462658 USP7Q93009 1102 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 HOOK2Q96ED9 719 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 TOX2Q96NM4 488 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 TACO1Q9BSH4 297 aaKnown RBP8.34□□□□□ -1.07
UBE4B-204ENST00000462658 TAF1DQ9H5J8 278 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-204ENST00000462658 ACSS2Q9NR19 701 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 GJB4Q9NTQ9 266 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 GGA3Q9NZ52 723 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 SPO11Q9Y5K1 396 aa8.34□□□□□ -1.07
UBE4B-204ENST00000462658 NEMP1O14524 444 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 SNHG28P0DPA3 235 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 HSPA6P17066 643 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 NCLP19338 710 aaKnown RBP8.33□□□□□ -1.08
UBE4B-204ENST00000462658 POU3F3P20264 500 aaPredicted RBP8.33□□□□□ -1.08
UBE4B-204ENST00000462658 SMARCA1P28370 1054 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 ASPRV1Q53RT3 343 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 PRR31Q5SQ13 230 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 TCERG1LQ5VWI1 586 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 ESRP1Q6NXG1 681 aaKnown RBP8.33□□□□□ -1.08
UBE4B-204ENST00000462658 FAM173BQ6P4H8 233 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 LRSAM1Q6UWE0 723 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 RASGRP2Q7LDG7 609 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 DNAJC5GQ8N7S2 189 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 PIBF1Q8WXW3 757 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 ANP32EQ9BTT0 268 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 SPZ1Q9BXG8 430 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 AMNQ9BXJ7 453 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 UBA5Q9GZZ9 404 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 LMBRD1Q9NUN5 540 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 ZBTB21Q9ULJ3 1066 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 CNPY2Q9Y2B0 182 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 PPP2R3BQ9Y5P8 575 aa8.33□□□□□ -1.08
UBE4B-204ENST00000462658 FRMPD2Q68DX3 1309 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 F5H6K3 240 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 CYTH3O43739 400 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 CTNND1O60716 968 aaKnown RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 MMP1P03956 469 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 SCG2P13521 617 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 VEGFAP15692 232 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 BPIP17213 487 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 LSSP48449 732 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 KRT85P78386 507 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 NFKB2Q00653 900 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 KIF23Q02241 960 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 KLRC3Q07444 240 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 ZNF543Q08ER8 600 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 PFKFB3Q16875 520 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 SLC35G1Q2M3R5 365 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 SUPT20HL1Q3ZLR7 823 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 GPATCH4Q5T3I0 446 aaKnown RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 SLFN13Q68D06 897 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 DLK2Q6UY11 383 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 USP50Q70EL3 339 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 RTN4RL1Q86UN2 441 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 EFHBQ8N7U6 833 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 GMCL1P1Q8NEA9 526 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 DCPSQ96C86 337 aaKnown RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 FOXRED1Q96CU9 486 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 ZNF396Q96N95 335 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-204ENST00000462658 ZNF341Q9BYN7 854 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 MS4A5Q9H3V2 200 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 VAT1LQ9HCJ6 419 aa8.32□□□□□ -1.08
UBE4B-204ENST00000462658 VPS54Q9P1Q0 977 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms