RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FAM126AQ9BYI3 521 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 DNAJC25Q9H1X3 360 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 BRD9Q9H8M2 597 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 TRPV4Q9HBA0 871 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZFP14Q9HCL3 533 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 TRPV5Q9NQA5 729 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 PCDHA7Q9UN72 937 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 MRPS17Q9Y2R5 130 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 YIPF1Q9Y548 306 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 PIAS3Q9Y6X2 628 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZFYVE26Q68DK2 2539 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 FRMD3A2A2Y4 597 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 H7C4K7 107 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 M0QZQ0 153 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF197O14709 1029 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 NCAM2O15394 837 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 FAM189A1O60320 539 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 FAM13AO94988 1023 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 OR4Q2P0C623 313 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 CXCL8P10145 99 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 CHRNB1P11230 501 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 HARSP12081 509 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 PSMC3P17980 439 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 MCM4P33991 863 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 TXLNAP40222 546 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 STAT6P42226 847 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 AARSP49588 968 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 SATB1Q01826 763 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 LMNB2Q03252 620 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 DMWDQ09019 674 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 TEAD2Q15562 447 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 STXBP5Q5T5C0 1151 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 RESP18Q5W5W9 173 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 SLC39A4Q6P5W5 647 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 CCDC73Q6ZRK6 1079 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 GPR161Q8N6U8 529 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 PDILTQ8N807 584 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 RASSF8Q8NHQ8 419 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZSCAN18Q8TBC5 510 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 DEPDC1BQ8WUY9 529 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 FAM3CQ92520 227 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 IRF7Q92985 503 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 CNTNAP3BQ96NU0 1288 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 IER2Q9BTL4 223 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 MKNK1Q9BUB5 465 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 CNTNAP3Q9BZ76 1288 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 PARVGQ9HBI0 331 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 ASAH2Q9NR71 780 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 C2orf42Q9NWW7 574 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 ANKFY1Q9P2R3 1169 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 CCDC39Q9UFE4 941 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 RCOR1Q9UKL0 485 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 RBM19Q9Y4C8 960 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 NUB1Q9Y5A7 615 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 FAM208BQ5VWN6 2430 aa8.61□□□□□ -1.03
CDC42BPA-210ENST00000462553 TTC26A0AVF1 554 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 HEPACAM2A8MVW5 462 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 K7ENM7 598 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 MAN2B1O00754 1011 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 TOM1L1O75674 476 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 PPP1R37O75864 691 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 OAZ2O95190 189 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 PIGRP01833 764 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 MYL4P12829 197 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 CPB1P15086 417 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 NMT1P30419 496 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 LRPAP1P30533 357 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 HOXC13P31276 330 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 TNFSF9P41273 254 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 SOX9P48436 509 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 CCR3P51677 355 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 SPAG1Q07617 926 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 MCL1Q07820 350 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 FCHO2Q0JRZ9 810 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 BECN1Q14457 450 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZBTB6Q15916 424 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 LPAL2Q16609 132 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 CYP4A22Q5TCH4 519 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 TXNDC11Q6PKC3 985 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 Q6ZS52 159 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 DYMQ7RTS9 669 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 HAUS6Q7Z4H7 955 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 SFR1Q86XK3 245 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 MFSD6LQ8IWD5 586 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 TTC9BQ8N6N2 239 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 LEO1Q8WVC0 666 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 LRRC3BQ96PB8 259 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 STRA6Q9BX79 667 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 FGFBP2Q9BYJ0 223 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 PANK2Q9BZ23 570 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 LMAN1LQ9HAT1 526 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 KBTBD4Q9NVX7 518 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 LARSQ9P2J5 1176 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 CDV3Q9UKY7 258 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 MAFFQ9ULX9 164 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 USP18Q9UMW8 372 aa8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 TIMM13Q9Y5L4 95 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPA-210ENST00000462553 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms