RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 FAM117BQ6P1L5 589 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 SLC39A11Q8N1S5 342 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 RBBP8NLQ8NC74 664 aaPredicted RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 C3orf58Q8NDZ4 430 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 KAT5Q92993 513 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 TMEM169Q96HH4 297 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 TMEM176AQ96HP8 235 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 IGSF21Q96ID5 467 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 CCDC42Q96M95 316 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 ARID3AQ99856 593 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 ACBD6Q9BR61 282 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.39□□□□□ -0.594e-61■■■■■ 208.2
RTF1-202ENST00000462276 PUF60Q9UHX1 559 aaKnown RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 L1RE1Q9UN81 338 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 SSX2IPQ9Y2D8 614 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 STXBP5LQ9Y2K9 1186 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 PCDHA11Q9Y5I1 949 aa11.39□□□□□ -0.59
RTF1-202ENST00000462276 MRPL42Q9Y6G3 142 aaKnown RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
RTF1-202ENST00000462276 A8MXQ7 604 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 H7C4K7 107 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 CYP26A1O43174 497 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 ARHGAP6O43182 974 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 B4GALT3O60512 393 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 IPO7O95373 1038 aaKnown RBP11.38□□□□□ -0.59
RTF1-202ENST00000462276 EFEMP2O95967 443 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 VDRP11473 427 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 CD58P19256 250 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 FGFR3P22607 806 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 PDE6CP51160 858 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 NDST1P52848 882 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 CDH8P55286 799 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 PLCB3Q01970 1234 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 YWHAHQ04917 246 aaPredicted RBP11.38□□□□□ -0.59
RTF1-202ENST00000462276 SMARCB1Q12824 385 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 RAB30Q15771 203 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 USP41Q3LFD5 358 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 WSCD1Q658N2 575 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 FUT10Q6P4F1 479 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 TRIM72Q6ZMU5 477 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 ANKS3Q6ZW76 656 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 DDX53Q86TM3 631 aaKnown RBP11.38□□□□□ -0.59
RTF1-202ENST00000462276 COLGALT1Q8NBJ5 622 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 TRIM44Q96DX7 344 aaPredicted RBP11.38□□□□□ -0.59
RTF1-202ENST00000462276 MARCH5Q9NX47 278 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 AJAP1Q9UKB5 411 aaPredicted RBP11.38□□□□□ -0.59
RTF1-202ENST00000462276 CDH9Q9ULB4 789 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 LZTS1Q9Y250 596 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 CEP290O15078 2479 aa11.38□□□□□ -0.59
RTF1-202ENST00000462276 CITO14578 2027 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 OR6C75A6NL08 312 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 CYP11B1P15538 503 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 CLCN1P35523 988 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 CYLC1P35663 651 aaPredicted RBP11.37□□□□□ -0.59
RTF1-202ENST00000462276 BMPR1AP36894 532 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 RAD23BP54727 409 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 CDR2Q01850 454 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 CREMQ03060 361 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 UBE3AQ05086 875 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 MRPL58Q14197 206 aaKnown RBP11.37□□□□□ -0.59
RTF1-202ENST00000462276 CNGA2Q16280 664 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 HABP4Q5JVS0 413 aaKnown RBP11.37□□□□□ -0.59
RTF1-202ENST00000462276 C9orf50Q5SZB4 431 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 C10orf76Q5T2E6 689 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 FAM171A1Q5VUB5 890 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 HGSNATQ68CP4 663 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 OVOS1Q6IE37 1185 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 WDR59Q6PJI9 974 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 SCARA5Q6ZMJ2 495 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 RNF168Q8IYW5 571 aaPredicted RBP11.37□□□□□ -0.59
RTF1-202ENST00000462276 TXLNBQ8N3L3 684 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 WHAMMQ8TF30 809 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 HEXIM2Q96MH2 286 aaKnown RBP11.37□□□□□ -0.59
RTF1-202ENST00000462276 MRPL45Q9BRJ2 306 aaKnown RBP11.37□□□□□ -0.59
RTF1-202ENST00000462276 TTPALQ9BTX7 342 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 ZNF518BQ9C0D4 1074 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 SDCBP2Q9H190 292 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 DEF6Q9H4E7 631 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 LUC7LQ9NQ29 371 aaKnown RBP11.37□□□□□ -0.59
RTF1-202ENST00000462276 CHST7Q9NS84 486 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 CEP83Q9Y592 693 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
RTF1-202ENST00000462276 A0A1W2PPC1 479 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 C5orf67F2Z3F1 127 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 AKR1B10O60218 316 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
RTF1-202ENST00000462276 SOD2P04179 222 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 ITGB1P05556 798 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 GZMAP12544 262 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 SKILP12757 684 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 TNFAIP3P21580 790 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 GNA15P30679 374 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 BRCC3P46736 316 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 TSPY1Q01534 308 aa11.36□□□□□ -0.59
RTF1-202ENST00000462276 ARID5AQ03989 594 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms