RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TTC26A0AVF1 554 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 SFI1A8K8P3 1242 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 CLDN3O15551 220 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 RPP40O75818 363 aaKnown RBP11.8□□□□□ -0.52
CBX3-205ENST00000462165 CXCL8P10145 99 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 TYMPP19971 482 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 SPAG1Q07617 926 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 ITPRIPL2Q3MIP1 535 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 ARHGAP15Q53QZ3 475 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 STPG1Q5TH74 334 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 ZPBP2Q6X784 338 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 ITIH5Q86UX2 942 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 ATAD1Q8NBU5 361 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 TMEM161BQ8NDZ6 487 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 SPIRE2Q8WWL2 714 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 C8orf76Q96K31 380 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 TMEM209Q96SK2 561 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 RAB34Q9BZG1 259 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 HAPLN2Q9GZV7 340 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 KCNG1Q9UIX4 513 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 SLC27A5Q9Y2P5 690 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 MYO16Q9Y6X6 1858 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 XPOTO43592 962 aaKnown RBP11.79□□□□□ -0.52
CBX3-205ENST00000462165 EXTL3O43909 919 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 ATG13O75143 517 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 AKAP3O75969 853 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 PRAMEF12O95522 483 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 CLTAP09496 248 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 MAPTP10636 758 aaKnown RBP11.79□□□□□ -0.52
CBX3-205ENST00000462165 GUCY2CP25092 1073 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 MCM2P49736 904 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 SMTNP53814 917 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 TNK2Q07912 1038 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 PTPAQ15257 358 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 CCDC6Q16204 474 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 TMEM196Q5HYL7 178 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 KRT79Q5XKE5 535 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 OVOS1Q6IE37 1185 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 PKN3Q6P5Z2 889 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 DSTYKQ6XUX3 929 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 KBTBD6Q86V97 674 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 TTC9BQ8N6N2 239 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 ZC3H10Q96K80 434 aaKnown RBP11.79□□□□□ -0.52
CBX3-205ENST00000462165 TASP1Q9H6P5 420 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 IL21Q9HBE4 155 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 THG1LQ9NWX6 298 aaKnown RBP11.79□□□□□ -0.52
CBX3-205ENST00000462165 NOL7Q9UMY1 257 aaKnown RBP11.79□□□□□ -0.52
CBX3-205ENST00000462165 SCN1AP35498 2009 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 NUP205Q92621 2012 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 KIAA1549LQ6ZVL6 1849 aa11.79□□□□□ -0.52
CBX3-205ENST00000462165 PP2D1A8MPX8 630 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 SOAT2O75908 522 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 KCNK5O95279 499 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 CCDC192P0DO97 292 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 PLS3P13797 630 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 PAX3P23760 479 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 CDC25CP30307 473 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 PXNP49023 591 aaPredicted RBP11.78□□□□□ -0.52
CBX3-205ENST00000462165 NEK4P51957 841 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 CYP4F8P98187 520 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 PPP2R3AQ06190 1150 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 NBR1Q14596 966 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 ARMCX5Q6P1M9 558 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 KCNK18Q7Z418 384 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 CAMKK1Q8N5S9 505 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 KCNN1Q92952 543 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 TSPAN18Q96SJ8 248 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 FAM83CQ9BQN1 747 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 MMTAG2Q9BU76 263 aaKnown RBP11.78□□□□□ -0.52
CBX3-205ENST00000462165 LSM14BQ9BX40 385 aaKnown RBP11.78□□□□□ -0.52
CBX3-205ENST00000462165 ZMYM5Q9UJ78 669 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 SLC8A2Q9UPR5 921 aa11.78□□□□□ -0.52
CBX3-205ENST00000462165 CEP295Q9C0D2 2601 aa11.77□□□□□ -0.52
CBX3-205ENST00000462165 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 TRDMT1O14717 391 aaKnown RBP11.77□□□□□ -0.53
CBX3-205ENST00000462165 CYP11A1P05108 521 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 PROS1P07225 676 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 ADRB2P07550 413 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 ODC1P11926 461 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 ATF6P18850 670 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 MPLP40238 635 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 TNFSF9P41273 254 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 MATR3P43243 847 aaKnown RBP eCLIP11.77□□□□□ -0.53
CBX3-205ENST00000462165 TUFMP49411 452 aaKnown RBP11.77□□□□□ -0.53
CBX3-205ENST00000462165 GUCY2FP51841 1108 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 NCKAP1LP55160 1127 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 LILRA4P59901 499 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 GRSF1Q12849 480 aaKnown RBP eCLIP11.77□□□□□ -0.53
CBX3-205ENST00000462165 RUNX3Q13761 415 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 VEPH1Q14D04 833 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 KYAT1Q16773 422 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 SPATA1Q5VX52 437 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 FSTL4Q6MZW2 842 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 CMTM8Q8IZV2 173 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 CHFRQ96EP1 664 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms