RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 A0A087WZ62 844 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 DNM1LO00429 736 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 CHUKO15111 745 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 DNAJC8O75937 253 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 COMTP21964 271 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 MARCKSL1P49006 195 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 MCL1Q07820 350 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 SEL1L2Q5TEA6 688 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 TSHZ1Q6ZSZ6 1077 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 RPAINQ86UA6 219 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 SLC13A5Q86YT5 568 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 SHC3Q92529 594 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 KREMEN1Q96MU8 473 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 FNBP1Q96RU3 617 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 FDXACB1Q9BRP7 624 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 ROPN1BQ9BZX4 212 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 LRRC19Q9H756 370 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 ROPN1Q9HAT0 212 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 RAB20Q9NX57 234 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 UVRAGQ9P2Y5 699 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 GTF3C4Q9UKN8 822 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 AOC2O75106 756 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 CSDE1O75534 798 aaKnown RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 TOMM70O94826 608 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 GSTA1P08263 222 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 CHN1P15882 459 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 COILP38432 576 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 PSMC4P43686 418 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 PHKA2P46019 1235 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 MNAT1P51948 309 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 CAP1Q01518 475 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 SLC29A2Q14542 456 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 AMHR2Q16671 573 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 ZACNQ401N2 412 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 ATF7IP2Q5U623 682 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 TDRD10Q5VZ19 366 aaKnown RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 EEF1DP3Q658K8 133 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 CCDC137Q6PK04 289 aaKnown RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 CPLX4Q7Z7G2 160 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 BRSK2Q8IWQ3 736 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 TRPV1Q8NER1 839 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 PPP1R13LQ8WUF5 828 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 ELMO3Q96BJ8 720 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 TACO1Q9BSH4 297 aaKnown RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 TCHPQ9BT92 498 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
COL4A6-204ENST00000461897 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 GABRQQ9UN88 632 aa13.23□□□□□ -0.29
COL4A6-204ENST00000461897 ANK1P16157 1881 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 OGTO15294 1046 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 RGS16O15492 202 aaPredicted RBP13.22□□□□□ -0.29
COL4A6-204ENST00000461897 RIPK2O43353 540 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 C4BPAP04003 597 aaKnown RBP13.22□□□□□ -0.29
COL4A6-204ENST00000461897 SMIM10L2AP0DMW4 78 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 SMIM10L2BP0DMW5 78 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 PYGMP11217 842 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 TNNI1P19237 187 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 SCTRP47872 440 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 FCGRTP55899 365 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 NOGQ13253 232 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 FAM187BQ17R55 369 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 AADACL2Q6P093 401 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 MPZL3Q6UWV2 235 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 TRMT10CQ7L0Y3 403 aaKnown RBP13.22□□□□□ -0.29
COL4A6-204ENST00000461897 CCDC91Q7Z6B0 441 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 NOP9Q86U38 636 aaKnown RBP13.22□□□□□ -0.29
COL4A6-204ENST00000461897 CDR2LQ86X02 465 aaPredicted RBP13.22□□□□□ -0.29
COL4A6-204ENST00000461897 CCDC50Q8IVM0 306 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 KIAA0319LQ8IZA0 1049 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 PPM1KQ8N3J5 372 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 CCDC197Q8NCU1 140 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 MDM1Q8TC05 714 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 TRIB2Q92519 343 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 CCDC114Q96M63 670 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 SEMA4AQ9H3S1 761 aa13.22□□□□□ -0.29
COL4A6-204ENST00000461897 PRMT7Q9NVM4 692 aaPredicted RBP13.22□□□□□ -0.29
COL4A6-204ENST00000461897 CCT8L1PA6NM43 557 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 HAS3O00219 553 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 ALDH1A1P00352 501 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 MMEP08473 750 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 CPT1AP50416 773 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 BEX3Q00994 111 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 FMO1Q01740 532 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 HIC1Q14526 733 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 ADAT2Q7Z6V5 191 aaKnown RBP13.21□□□□□ -0.29
COL4A6-204ENST00000461897 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 OR5B17Q8NGF7 314 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 SGSM3Q96HU1 749 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 NT5C1BQ96P26 610 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 NCAPGQ9BPX3 1015 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms