RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR4Q2P0C623 313 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-207ENST00000461798 PNPLA4P41247 253 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 ALDH1A3P47895 512 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 TUFMP49411 452 aaKnown RBP9.89□□□□□ -0.83
BRCA1-207ENST00000461798 EPHB3P54753 998 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 AMPD3Q01432 767 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 SNW1Q13573 536 aaKnown RBP9.89□□□□□ -0.83
BRCA1-207ENST00000461798 ANGPT1Q15389 498 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 SHC4Q6S5L8 630 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 DNAJB7Q7Z6W7 309 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-207ENST00000461798 METTL23Q86XA0 190 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 TMC8Q8IU68 726 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 SYCP3Q8IZU3 236 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 THEM5Q8N1Q8 247 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 PDILTQ8N807 584 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 IQUBQ8NA54 791 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 ATAD1Q8NBU5 361 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 PJA1Q8NG27 643 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 OR10T2Q8NGX3 314 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 CXorf38Q8TB03 319 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 C2orf15Q8WU43 125 aaKnown RBP9.89□□□□□ -0.83
BRCA1-207ENST00000461798 CACTINQ8WUQ7 758 aaKnown RBP9.89□□□□□ -0.83
BRCA1-207ENST00000461798 DNASE1L2Q92874 299 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 PSMG2Q969U7 264 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 E2F7Q96AV8 911 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 ZSWIM3Q96MP5 696 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 C7orf25Q9BPX7 421 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 FAM213AQ9BRX8 229 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 FGFBP2Q9BYJ0 223 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 TRIM9Q9C026 710 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 ZFP14Q9HCL3 533 aa9.89□□□□□ -0.83
BRCA1-207ENST00000461798 PDCD11Q14690 1871 aaKnown RBP9.89□□□□□ -0.83
BRCA1-207ENST00000461798 SHISA7A6NL88 538 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 GFRA3O60609 400 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 PRPF6O94906 941 aaKnown RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 FGF19O95750 216 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 MYL4P12829 197 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 GLULP15104 373 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 PSMC3P17980 439 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 RFX1P22670 979 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 WEE1P30291 646 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 HOXD13P35453 343 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 MAGEA9P43362 315 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 MLLT6P55198 1093 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 WNT7BP56706 349 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 SNRPFP62306 86 aaKnown RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 SV2CQ496J9 727 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 WSCD1Q658N2 575 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 STXBP4Q6ZWJ1 553 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 LRRTM3Q86VH5 581 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 MFSD6LQ8IWD5 586 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 LRRC52Q8N7C0 313 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 C1orf127Q8N9H9 656 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 ZSWIM2Q8NEG5 633 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 SHKBP1Q8TBC3 707 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 SPATA18Q8TC71 538 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 ZNF507Q8TCN5 953 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 KCNG4Q8TDN1 519 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 DEPDC1BQ8WUY9 529 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 CLDN23Q96B33 292 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 SAAL1Q96ER3 474 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 PGLYRP2Q96PD5 576 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 TMEM209Q96SK2 561 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 PYM1Q9BRP8 204 aaKnown RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 CBWD1Q9BRT8 395 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 TRMT61BQ9BVS5 477 aaKnown RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 FOXQ1Q9C009 403 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 SEMA4AQ9H3S1 761 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 MAGEF1Q9HAY2 307 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 GDAP2Q9NXN4 497 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 RBAKQ9NYW8 714 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 RCOR1Q9UKL0 485 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 SLC27A5Q9Y2P5 690 aa9.88□□□□□ -0.83
BRCA1-207ENST00000461798 PTPRZ1P23471 2315 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-207ENST00000461798 RIF1Q5UIP0 2472 aaKnown RBP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 PRR23AA6NEV1 266 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 FAM170BA6NMN3 283 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 F13A1P00488 732 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 DCNP07585 359 aaKnown RBP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 RBP5P82980 135 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 TFAMQ00059 246 aaKnown RBP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 EHHADHQ08426 723 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 FZD5Q13467 585 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 SURF1Q15526 300 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 TEAD2Q15562 447 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 VITQ6UXI7 678 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 ZNF852Q6ZMS4 543 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 GAREM2Q75VX8 874 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 ASCL5Q7RTU5 278 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 LIMS2Q7Z4I7 341 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 FRMD5Q7Z6J6 570 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 ITIH5Q86UX2 942 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 C1orf210Q8IVY1 113 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 HSCBQ8IWL3 235 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 DCP1BQ8IZD4 617 aaKnown RBP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 GPD1LQ8N335 351 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms