RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 MORC3Q14149 939 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 KLHL10Q6JEL2 608 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 TCEAL8Q8IYN2 117 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 DCP1BQ8IZD4 617 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 ADGRF2Q8IZF7 708 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 ELMOD1Q8N336 334 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 TRIML1Q8N9V2 468 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 TDRD5Q8NAT2 981 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 OR10T2Q8NGX3 314 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 SPATA18Q8TC71 538 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 SYAP1Q96A49 352 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZNF707Q96C28 371 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 ACSF2Q96CM8 615 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 TMEM209Q96SK2 561 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 MMS19Q96T76 1030 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 MKNK1Q9BUB5 465 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZCWPW1Q9H0M4 648 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 GZF1Q9H116 711 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 CLSTN2Q9H4D0 955 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 WDR6Q9NNW5 1121 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 CD320Q9NPF0 282 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 LMBRD1Q9NUN5 540 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 DDX43Q9NXZ2 648 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 DENND4AQ7Z401 1863 aa11.37□□□□□ -0.59
TRAPPC12-213ENST00000461577 CLUHO75153 1309 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 TRIM49BA6NDI0 452 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 IKBKBO14920 756 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 PAPLNO95428 1278 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 POU2F2P09086 479 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 TRIM49P0CI25 452 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 TRIM49CP0CI26 452 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 LHX1P48742 406 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 MYL6P60660 151 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 CLDN10P78369 228 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 ENPEPQ07075 957 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 NCOA4Q13772 614 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 SLC39A12Q504Y0 691 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 DPH6Q7L8W6 267 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 OTOP3Q7RTS5 596 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 NELFBQ8WX92 580 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 EEF2KMTQ96G04 330 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 RTP3Q9BQQ7 232 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 NUP62CLQ9H1M0 184 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 MMRN2Q9H8L6 949 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 NXF1Q9UBU9 619 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 CTNND2Q9UQB3 1225 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 USTQ9Y2C2 406 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 INSL5Q9Y5Q6 135 aa11.36□□□□□ -0.59
TRAPPC12-213ENST00000461577 BICDL2A1A5D9 508 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 MTMR11A4FU01 709 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 C2CD4DB7Z1M9 353 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 SLC16A3O15427 465 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 STX10O60499 249 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 P4HA1P13674 534 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 PTPN2P17706 415 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 FSHRP23945 695 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 PCSK1P29120 753 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 GBP2P32456 591 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 PIK3CAP42336 1068 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 ALDH1A3P47895 512 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 PMS1P54277 932 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 TWF1Q12792 350 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 SMARCB1Q12824 385 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 DUSP4Q13115 394 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 PLD1Q13393 1074 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 SOWAHAQ2M3V2 549 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZNF699Q32M78 642 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 WDR72Q3MJ13 1102 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZACNQ401N2 412 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZNF667Q5HYK9 610 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 GET4Q7L5D6 327 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 OSTM1Q86WC4 334 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 RNF135Q8IUD6 432 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 C2orf15Q8WU43 125 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 ZNF512Q96ME7 567 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 ACBD6Q9BR61 282 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 SNX25Q9H3E2 840 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 SLC27A5Q9Y2P5 690 aa11.35□□□□□ -0.59
TRAPPC12-213ENST00000461577 VNN1O95497 513 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 VNN2O95498 520 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 HLA-DRAP01903 254 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 BMP6P22004 513 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 WARSP23381 471 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 ACAT1P24752 427 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 GTF2H1P32780 548 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 GCLMP48507 274 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 TUFMP49411 452 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 EPHB3P54753 998 aa11.34□□□□□ -0.59
TRAPPC12-213ENST00000461577 STX17P56962 302 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms