RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 PNPLA4P41247 253 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 TFAMQ00059 246 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 AMPD3Q01432 767 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 SMARCB1Q12824 385 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 TEAD2Q15562 447 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 SLC39A12Q504Y0 691 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 FOXD4L5Q5VV16 416 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 STXBP4Q6ZWJ1 553 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 FRMD5Q7Z6J6 570 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 THEM5Q8N1Q8 247 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 TTC9BQ8N6N2 239 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 IQUBQ8NA54 791 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 KCNG4Q8TDN1 519 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 PSMG2Q969U7 264 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 OBSL1O75147 1896 aa12.74□□□□□ -0.37
SOX2-OT-201ENST00000460739 GOLGA8IPA6NC78 632 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 PRR23AA6NEV1 266 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 EIF3DO15371 548 aaKnown RBP eCLIP12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 ITGB3P05106 788 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 GJA1P17302 382 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 HOXD13P35453 343 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 TUFMP49411 452 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 WSCD1Q658N2 575 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 VITQ6UXI7 678 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 EPM2AIP1Q7L775 607 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 ASCL5Q7RTU5 278 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 DNAJB7Q7Z6W7 309 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 GPD1LQ8N335 351 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 LRRC52Q8N7C0 313 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 C1orf127Q8N9H9 656 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 GLIS3Q8NEA6 775 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZSCAN18Q8TBC5 510 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 C2orf15Q8WU43 125 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 HPS3Q969F9 1004 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 DHX58Q96C10 678 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 C7orf25Q9BPX7 421 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 PCIF1Q9H4Z3 704 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 MAGEF1Q9HAY2 307 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 ITGA11Q9UKX5 1188 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 AGAP1Q9UPQ3 857 aa12.73□□□□□ -0.37
SOX2-OT-201ENST00000460739 A0A1W2PRU2 124 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 LRRN2O75325 713 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 SOAT2O75908 522 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 FGF19O95750 216 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 PSMC3P17980 439 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 ATF6P18850 670 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 VIPR2P41587 438 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 ASIC1P78348 528 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 EHHADHQ08426 723 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 GRM2Q14416 872 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 TPRG1Q6ZUI0 275 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 GAREM2Q75VX8 874 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 LRRTM3Q86VH5 581 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 C1orf210Q8IVY1 113 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 MFSD6LQ8IWD5 586 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZNF507Q8TCN5 953 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 DEPDC1BQ8WUY9 529 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 IRF7Q92985 503 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 NKD2Q969F2 451 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 E2F7Q96AV8 911 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 NELL2Q99435 816 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 BRD9Q9H8M2 597 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 PDE11AQ9HCR9 933 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 LTB4R2Q9NPC1 389 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 TRPV5Q9NQA5 729 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 HEBP1Q9NRV9 189 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 KIF26AQ9ULI4 1882 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-201ENST00000460739 NCANO14594 1321 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 ZNF233A6NK53 670 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 SHISA7A6NL88 538 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 FAM170BA6NMN3 283 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 POLR2DO15514 142 aaKnown RBP12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 HUS1O60921 280 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 HAPLN1P10915 354 aaPredicted RBP12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 CD72P21854 359 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 MAGEA9P43362 315 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 ME1P48163 572 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 PKP1Q13835 747 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 UBXN2BQ14CS0 331 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 SURF1Q15526 300 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 RESP18Q5W5W9 173 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
SOX2-OT-201ENST00000460739 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms