RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ADH1AP07327 375 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 CTSAP10619 480 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 MYOGP15173 224 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 WARSP23381 471 aaKnown RBP11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 CA8P35219 290 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 GNL1P36915 607 aaPredicted RBP11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 GUCY2FP51841 1108 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 SLC8A3P57103 927 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 DSG1Q02413 1049 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 SYCP1Q15431 976 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 NFE2Q16621 373 aaPredicted RBP11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 FIGNQ5HY92 759 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 SPECC1LQ69YQ0 1117 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 RTL10Q7L3V2 364 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 ADGRF2Q8IZF7 708 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 OR6B3Q8NGW1 331 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 CXorf38Q8TB03 319 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 HASPINQ8TF76 798 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 C2orf15Q8WU43 125 aaKnown RBP11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 MRFAP1L1Q96HT8 127 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 CDCA3Q99618 268 aaPredicted RBP11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 TCF25Q9BQ70 676 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 ACBD6Q9BR61 282 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 PAAF1Q9BRP4 392 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 NT5C1AQ9BXI3 368 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 UBE2TQ9NPD8 197 aaPredicted RBP11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 CHST7Q9NS84 486 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 MARCH5Q9NX47 278 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 FNIP2Q9P278 1114 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 MYO6Q9UM54 1294 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 BARX2Q9UMQ3 279 aaPredicted RBP11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 IRAK3Q9Y616 596 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 ITIH6Q6UXX5 1313 aa11.78□□□□□ -0.52
SMNDC1-203ENST00000460483 NCK2O43639 380 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 CXCL14O95715 111 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 UCHL3P15374 230 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 BRCC3P46736 316 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 NDUFV1P49821 464 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 STILQ15468 1287 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 CTXN3Q4LDR2 81 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 KLHDC7AQ5VTJ3 777 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 C4orf50Q6ZRC1 276 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 DRC7Q8IY82 874 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 PDCL2Q8N4E4 241 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 POF1BQ8WVV4 589 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 RIN2Q8WYP3 895 aaPredicted RBP11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 GAS2L1Q99501 681 aaPredicted RBP11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 LSM14BQ9BX40 385 aaKnown RBP11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 STK33Q9BYT3 514 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 BCO2Q9BYV7 579 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 GPR62Q9BZJ7 368 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 XPO4Q9C0E2 1151 aaKnown RBP11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 CXCL16Q9H2A7 254 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 FAM207AQ9NSI2 230 aaPredicted RBP11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 DDX43Q9NXZ2 648 aaKnown RBP11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 CEP72Q9P209 647 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 CDH9Q9ULB4 789 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 ATP8B3O60423 1300 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 SCN5AQ14524 2016 aa11.77□□□□□ -0.53
SMNDC1-203ENST00000460483 MED7O43513 233 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 ITGB1P05556 798 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 SLC9A1P19634 815 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 ELF1P32519 619 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 PBX3P40426 434 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 STAT1P42224 750 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 PTK2Q05397 1052 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 LRMPQ12912 555 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 PSMD5Q16401 504 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 SOWAHAQ2M3V2 549 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 TPGS2Q68CL5 300 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 GAS2L3Q86XJ1 694 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 MRPL43Q8N983 215 aaKnown RBP11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 C3orf58Q8NDZ4 430 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 RABGGTAQ92696 567 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 MRPL38Q96DV4 380 aaKnown RBP11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 ZBP1Q9H171 429 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 ALG13Q9NP73 1137 aaKnown RBP11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 CISHQ9NSE2 258 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 ZNHIT6Q9NWK9 470 aaKnown RBP11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 DNAJC12Q9UKB3 198 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
SMNDC1-203ENST00000460483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 A0A1W2PQJ5 194 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 GABRDO14764 452 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 SPTLC1O15269 473 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 NRDCO43847 1150 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 B4GALT3O60512 393 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 PAEPP09466 180 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms