RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CEP85LQ5SZL2 805 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 ZNF365Q70YC5 407 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 APBB1IPQ7Z5R6 666 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 PRUNE1Q86TP1 453 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 RAET1EQ8TD07 263 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 FAM81BQ96LP2 452 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 RASAL2Q9UJF2 1139 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 NRCAMQ92823 1304 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 MIF4GDA9UHW6 222 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 IL18RAPO95256 599 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 KRT14P02533 472 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 MCF2P10911 925 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 RALAP11233 206 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 ADCY8P40145 1251 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 CALCOCO2Q13137 446 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 CCDC33Q8N5R6 958 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 TTC16Q8NEE8 873 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 BEST2Q8NFU1 509 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 TMEM40Q8WWA1 233 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 SNX25Q9H3E2 840 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 UVRAGQ9P2Y5 699 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 STYXL1Q9Y6J8 313 aa9.92□□□□□ -0.82
NUDCD3-203ENST00000460110 BRCA1P38398 1863 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 A0A0A6YYK5 440 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 PIGRP01833 764 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 LCP1P13796 627 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 EPHB4P54760 987 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 NOMO3P69849 1222 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 PTPN11Q06124 597 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 MAMDC4Q6UXC1 1216 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 XPNPEP3Q9NQH7 507 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 PARVAQ9NVD7 372 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 I3L4J1 428 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 RNF40O75150 1001 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 GNAT1P11488 350 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 ACO1P21399 889 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 CTNNA1P35221 906 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 SLCO1A2P46721 670 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 PPP6R3Q5H9R7 873 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 MARCH8Q5T0T0 291 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 DCAF12L1Q5VU92 463 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 CDCA2Q69YH5 1023 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 SLC27A1Q6PCB7 646 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 DDX1Q92499 740 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 HES6Q96HZ4 224 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 APBA2Q99767 749 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 WNT8AQ9H1J5 351 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 METTL5Q9NRN9 209 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 SAE1Q9UBE0 346 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 SIX4Q9UIU6 781 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 RAB21Q9UL25 225 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 MROH7Q68CQ1 1323 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 ADGRA2Q96PE1 1338 aa9.91□□□□□ -0.82
NUDCD3-203ENST00000460110 CASTOR2A6NHX0 329 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 RNF8O76064 485 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 TCF4P15884 667 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 CAPN2P17655 700 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 TAS2R40P59535 323 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 RSPH3Q86UC2 560 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 TAX1BP1Q86VP1 789 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 SH2D3CQ8N5H7 860 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 FEZF2Q8TBJ5 459 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 GAD1Q99259 594 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 CARD9Q9H257 536 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 FAM204AQ9H8W3 233 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 MED7O43513 233 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 CSPG5O95196 566 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 POMCP01189 267 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 RFC1P35251 1148 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 RABGGTBP53611 331 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 MAMLD1Q13495 774 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 SNX17Q15036 470 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 C15orf39Q6ZRI6 1047 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 KAT2BQ92831 832 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 NT5C1AQ9BXI3 368 aa9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 MRPL42Q9Y6G3 142 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-203ENST00000460110 GOLGA6CA6NDK9 693 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 A6NJR5 290 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 MEIS3P2A8K0S8 358 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 CCDC188H7C350 402 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 GOLGA6DP0CG33 693 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 ZNF865P0CJ78 1059 aaPredicted RBP9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 YY1P25490 414 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 SLC13A5Q86YT5 568 aaPredicted RBP9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 SCUBE3Q8IX30 993 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 TSEN2Q8NCE0 465 aaKnown RBP9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 LRRN4Q8WUT4 740 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 TMEM176AQ96HP8 235 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 ZMAT2Q96NC0 199 aaKnown RBP9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 ADAM33Q9BZ11 813 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 SDCBP2Q9H190 292 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 GOLGA6AQ9NYA3 693 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 CDY2AQ9Y6F7 541 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 SCINQ9Y6U3 715 aa9.9□□□□□ -0.83
NUDCD3-203ENST00000460110 SBF1O95248 1867 aa9.89□□□□□ -0.83
NUDCD3-203ENST00000460110 DDX3YO15523 660 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms