RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 ROR1Q01973 937 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 GRIK3Q13003 919 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 STXBP5Q5T5C0 1151 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 KIAA1614Q5VZ46 1190 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 NAIF1Q69YI7 327 aaPredicted RBP8.93□□□□□ -0.98
NCSTN-209ENST00000459963 RHPN2Q8IUC4 686 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 ITPRIPQ8IWB1 547 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 EXD3Q8N9H8 876 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 CCDC26Q8TAB7 109 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 FAM83CQ9BQN1 747 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 RNF41Q9H4P4 317 aaPredicted RBP8.93□□□□□ -0.98
NCSTN-209ENST00000459963 IL21RQ9HBE5 538 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 GKN1Q9NS71 199 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 TM7SF3Q9NS93 570 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 GIT1Q9Y2X7 761 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 HES2Q9Y543 173 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 BOD1L1Q8NFC6 3051 aa8.93□□□□□ -0.98
NCSTN-209ENST00000459963 UTP20O75691 2785 aaKnown RBP8.92□□□□□ -0.98
NCSTN-209ENST00000459963 KIAA1549LQ6ZVL6 1849 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 SPDYE3A6NKU9 549 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 IPO5O00410 1097 aaKnown RBP8.92□□□□□ -0.98
NCSTN-209ENST00000459963 SEC24AO95486 1093 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 FGFR3P22607 806 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 NT5C2P49902 561 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 SCRN1Q12765 414 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 TARDBPQ13148 414 aaKnown RBP eCLIP8.92□□□□□ -0.98
NCSTN-209ENST00000459963 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 USP33Q8TEY7 942 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 NLRP4Q96MN2 994 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 TBC1D32Q96NH3 1257 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 POLR3CQ9BUI4 534 aaPredicted RBP8.92□□□□□ -0.98
NCSTN-209ENST00000459963 EBF3Q9H4W6 596 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 FAM124BQ9H5Z6 455 aaPredicted RBP8.92□□□□□ -0.98
NCSTN-209ENST00000459963 IFT122Q9HBG6 1241 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 GPRC5CQ9NQ84 441 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 NRBP2Q9NSY0 501 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 GABBR1Q9UBS5 961 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 SUSD2Q9UGT4 822 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 MMP17Q9ULZ9 603 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 TBX20Q9UMR3 447 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 PCDHA6Q9UN73 950 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 PCDHGB2Q9Y5G2 931 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 PCDHA8Q9Y5H6 950 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 GON4LQ3T8J9 2241 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 CSMD1Q96PZ7 3565 aa8.92□□□□□ -0.98
NCSTN-209ENST00000459963 TTC24A2A3L6 582 aaPredicted RBP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 CASTOR2A6NHX0 329 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 TRIM66O15016 1216 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 CILPO75339 1184 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 PRAMEF12O95522 483 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 HNRNPLP14866 589 aaKnown RBP eCLIP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 GNSP15586 552 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 DNM2P50570 870 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 CLDN6P56747 220 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 PCBP4P57723 403 aaKnown RBP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 TWF1Q12792 350 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 TUSC3Q13454 348 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 CEP55Q53EZ4 464 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 ZKSCAN2Q63HK3 967 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 TSHZ3Q63HK5 1081 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 TRIM68Q6AZZ1 485 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 ZNF787Q6DD87 383 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 SLC8B1Q6J4K2 584 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 SLC36A4Q6YBV0 504 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 ANKS3Q6ZW76 656 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 TICAM1Q8IUC6 712 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 SLC41A1Q8IVJ1 513 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 KSR1Q8IVT5 923 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 FAM9BQ8IZU0 186 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 PIBF1Q8WXW3 757 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 CD101Q93033 1021 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 GPATCH3Q96I76 525 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 EIF2AQ9BY44 585 aaKnown RBP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 GAREM1Q9H706 876 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 PSTPIP2Q9H939 334 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 BCCIPQ9P287 314 aaKnown RBP eCLIP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 BTBD3Q9Y2F9 522 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 SPENQ96T58 3664 aaKnown RBP8.91□□□□□ -0.98
NCSTN-209ENST00000459963 PLXND1Q9Y4D7 1925 aa8.91□□□□□ -0.98
NCSTN-209ENST00000459963 ITPR2Q14571 2701 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 MYO16Q9Y6X6 1858 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 DHX15O43143 795 aaKnown RBP8.9□□□□□ -0.98
NCSTN-209ENST00000459963 CER1O95813 267 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 PRKCBP05771 671 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 PSAPP07602 524 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 GJA4P35212 333 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 SREBF1P36956 1147 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 UBE2SQ16763 222 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 IFIT1BQ5T764 474 aaKnown RBP8.9□□□□□ -0.98
NCSTN-209ENST00000459963 SMAP1Q8IYB5 467 aaPredicted RBP8.9□□□□□ -0.98
NCSTN-209ENST00000459963 RGL4Q8IZJ4 473 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 CCDC33Q8N5R6 958 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 TRIML1Q8N9V2 468 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 ENGASEQ8NFI3 743 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 HSPA12BQ96MM6 686 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 LRRC3Q9BY71 257 aa8.9□□□□□ -0.98
NCSTN-209ENST00000459963 SUCLA2Q9P2R7 463 aaPredicted RBP8.9□□□□□ -0.98
NCSTN-209ENST00000459963 FNDC3AQ9Y2H6 1198 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms