RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PBX3P40426 434 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 CLCNKBP51801 687 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 JAM2P57087 298 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 ZNF699Q32M78 642 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 FIGNQ5HY92 759 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 C9orf57Q5W0N0 161 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 OR8K1Q8NGG5 319 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 HPDLQ96IR7 371 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 SPAG5Q96R06 1193 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 DNAJC7Q99615 494 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 SMYD3Q9H7B4 428 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
USP39-210ENST00000459775 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 ERICH4A6NGS2 130 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 F8VZ95 297 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 CYP26A1O43174 497 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 ITGB1P05556 798 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 THP07101 528 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 SETSIPP0DME0 302 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 CD53P19397 219 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 MAGEA8P43361 318 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 RAB27AP51159 221 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 ENPEPQ07075 957 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 TSNAXIP1Q2TAA8 658 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 MICALL1Q8N3F8 863 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 MYLIPQ8WY64 445 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 FTHL17Q9BXU8 183 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 C1orf112Q9NSG2 853 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
USP39-210ENST00000459775 ARHGAP20Q9P2F6 1191 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 A0A0U1RQJ8 604 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 A0A1W2PQJ5 194 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 TLDC2A0PJX2 215 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 TPM1P09493 284 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 PLA2G5P39877 138 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 ASPAP45381 313 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 AP3M2P53677 418 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 GSDMDP57764 484 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 IKBKEQ14164 716 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 COL19A1Q14993 1142 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 SHHQ15465 462 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 CC2D1AQ6P1N0 951 aaPredicted RBP11.03□□□□□ -0.64
USP39-210ENST00000459775 RAD9BQ6WBX8 426 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 IRF2BP2Q7Z5L9 587 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 CNGA4Q8IV77 575 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 CD302Q8IX05 232 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 BEST2Q8NFU1 509 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 ATRIPQ8WXE1 791 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 PGBD4Q96DM1 585 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 BAG1Q99933 345 aaPredicted RBP11.03□□□□□ -0.64
USP39-210ENST00000459775 LPIN3Q9BQK8 851 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 STK33Q9BYT3 514 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 HMGXB4Q9UGU5 601 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 UBQLN1Q9UMX0 589 aaKnown RBP11.03□□□□□ -0.64
USP39-210ENST00000459775 TFR2Q9UP52 801 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 PCDHB7Q9Y5E2 793 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 SNX9Q9Y5X1 595 aa11.03□□□□□ -0.64
USP39-210ENST00000459775 ANO9A1A5B4 782 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 PIRO00625 290 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 KRT5P13647 590 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 ACO1P21399 889 aaKnown RBP11.02□□□□□ -0.64
USP39-210ENST00000459775 RBP5P82980 135 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 CUL2Q13617 745 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 TRIM14Q14142 442 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 SFMBT2Q5VUG0 894 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 HGSNATQ68CP4 663 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 CNKSR3Q6P9H4 555 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 GLB1LQ6UWU2 654 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 ZNF365Q70YC5 407 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 HACE1Q8IYU2 909 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 TMEM199Q8N511 208 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 CCDC150Q8NCX0 1101 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 SLC20A1Q8WUM9 679 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 ATXN2LQ8WWM7 1075 aaKnown RBP11.02□□□□□ -0.64
USP39-210ENST00000459775 CASD1Q96PB1 797 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 MMS19Q96T76 1030 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 EPAS1Q99814 870 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 TMEM161AQ9NX61 479 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 ITGA11Q9UKX5 1188 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 LRFN2Q9ULH4 789 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 NME7Q9Y5B8 376 aa11.02□□□□□ -0.64
USP39-210ENST00000459775 TIMM13Q9Y5L4 95 aaPredicted RBP11.02□□□□□ -0.64
USP39-210ENST00000459775 CITO14578 2027 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 EOMESO95936 686 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 CCDC142Q17RM4 750 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 ZNF667Q5HYK9 610 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 NOMO2Q5JPE7 1267 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 TOGARAM2Q6ZUX3 1019 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 SLC47A2Q86VL8 602 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 NT5DC4Q86YG4 428 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 ZNF397Q8NF99 534 aaPredicted RBP11.02□□□□□ -0.65
USP39-210ENST00000459775 APBB2Q92870 758 aa11.02□□□□□ -0.65
USP39-210ENST00000459775 POM121Q96HA1 1249 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms