RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PDZD4Q76G19 769 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-203ENST00000459756 WDR49Q8IV35 697 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 FSIP1Q8NA03 581 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 XXYLT1Q8NBI6 393 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 ING5Q8WYH8 240 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 FAM122AQ96E09 287 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 TMEM209Q96SK2 561 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 PRRX2Q99811 253 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 RTP3Q9BQQ7 232 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 MFSD1Q9H3U5 465 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 CEP72Q9P209 647 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 WNT16Q9UBV4 365 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 SIX4Q9UIU6 781 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 KMT2EQ8IZD2 1858 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 CLIC2O15247 247 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 HUS1O60921 280 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
COL7A1-203ENST00000459756 AVPR2P30518 371 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 EPHB3P54753 998 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 EPHA5P54756 1037 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 SMARCB1Q12824 385 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 BFSP1Q12934 665 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 MYO1EQ12965 1108 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 STK4Q13043 487 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 SLC39A12Q504Y0 691 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 TMEM86AQ8N2M4 240 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 ATAD1Q8NBU5 361 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 OR5B17Q8NGF7 314 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 C2orf15Q8WU43 125 aaKnown RBP17.35■□□□□ 0.37
COL7A1-203ENST00000459756 FGF14Q92915 247 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 FAM84AQ96KN4 292 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 FNBP1Q96RU3 617 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 CRISPLD1Q9H336 500 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 ASAH2Q9NR71 780 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 GDAP2Q9NXN4 497 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 SLC27A5Q9Y2P5 690 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 PTPRJQ12913 1337 aa17.35■□□□□ 0.37
COL7A1-203ENST00000459756 RPN1P04843 607 aaKnown RBP17.34■□□□□ 0.37
COL7A1-203ENST00000459756 CFHP08603 1231 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 CEBPBP17676 345 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 TUFMP49411 452 aaKnown RBP17.34■□□□□ 0.37
COL7A1-203ENST00000459756 VCPP55072 806 aaKnown RBP17.34■□□□□ 0.37
COL7A1-203ENST00000459756 CYP24A1Q07973 514 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 PSMD6Q15008 389 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 LMBRD2Q68DH5 695 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-203ENST00000459756 KRBA2Q6ZNG9 492 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 DCP1BQ8IZD4 617 aaKnown RBP17.34■□□□□ 0.37
COL7A1-203ENST00000459756 PDCL2Q8N4E4 241 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 TOP6BLQ8N6T0 577 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 RDH13Q8NBN7 331 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 KIAA0895Q8NCT3 520 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 SPATA18Q8TC71 538 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 CCDC47Q96A33 483 aaKnown RBP17.34■□□□□ 0.37
COL7A1-203ENST00000459756 MCRS1Q96EZ8 462 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 GDPD2Q9HCC8 539 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 SLC2A4RGQ9NR83 387 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 ASB3Q9Y575 518 aa17.34■□□□□ 0.37
COL7A1-203ENST00000459756 EXOC3O60645 756 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 ECI2O75521 394 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 DLATP10515 647 aaKnown RBP17.33■□□□□ 0.36
COL7A1-203ENST00000459756 TNNI1P19237 187 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 CCR2P41597 374 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 CLCN5P51795 746 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 NUBP1P53384 320 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 TSPY1Q01534 308 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 ASTLQ6HA08 431 aaPredicted RBP17.33■□□□□ 0.36
COL7A1-203ENST00000459756 ITIH5Q86UX2 942 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 HS6ST3Q8IZP7 471 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 SIX5Q8N196 739 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 ST13P5Q8NFI4 369 aaPredicted RBP17.33■□□□□ 0.36
COL7A1-203ENST00000459756 SPPL2BQ8TCT7 592 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 TMEM174Q8WUU8 243 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 CCDC127Q96BQ5 260 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 TCEAL4Q96EI5 215 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 HPDLQ96IR7 371 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 CGRRF1Q99675 332 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 RPP25Q9BUL9 199 aaKnown RBP17.33■□□□□ 0.36
COL7A1-203ENST00000459756 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 L1RE1Q9UN81 338 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 SNX9Q9Y5X1 595 aa17.33■□□□□ 0.36
COL7A1-203ENST00000459756 ZNF202O95125 648 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 KIF20AO95235 890 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 MYL4P12829 197 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 MYL7Q01449 175 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 NFE2Q16621 373 aaPredicted RBP17.32■□□□□ 0.36
COL7A1-203ENST00000459756 IER5LQ5T953 404 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 SCARA3Q6AZY7 606 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 DPH6Q7L8W6 267 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 TRAPPC11Q7Z392 1133 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 LRRTM3Q86VH5 581 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 TTC9BQ8N6N2 239 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 GPR152Q8TDT2 470 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 PSMG2Q969U7 264 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 SEPT5Q99719 369 aaPredicted RBP17.32■□□□□ 0.36
COL7A1-203ENST00000459756 KXD1Q9BQD3 176 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 ACBD6Q9BR61 282 aa17.32■□□□□ 0.36
COL7A1-203ENST00000459756 DDX43Q9NXZ2 648 aaKnown RBP17.32■□□□□ 0.36
COL7A1-203ENST00000459756 PDXKO00764 312 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms