RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 NINJ2Q9NZG7 142 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 KLHL14Q9P2G3 628 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 ANKFY1Q9P2R3 1169 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 TPX2Q9ULW0 747 aaKnown RBP9.35□□□□□ -0.91
HDAC3-202ENST00000459727 RIPK3Q9Y572 518 aa9.35□□□□□ -0.91
HDAC3-202ENST00000459727 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 EXOC1LA0A1B0GW35 172 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 FZD9O00144 591 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 B4GALT4O60513 344 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 HNRNPCL1O60812 293 aaKnown RBP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SPAG6O75602 509 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 GJB6O95452 261 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ALDH3A1P30838 453 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ATICP31939 592 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 MAGEA4P43358 317 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SLCO1A2P46721 670 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 STAT5BP51692 787 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SNX16P57768 344 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 TNFAIP2Q03169 654 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 POU5F1BQ06416 359 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SPARCL1Q14515 664 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 LONRF1Q17RB8 773 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 KLHL38Q2WGJ6 581 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 TBC1D10BQ4KMP7 808 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 NBPF12Q5TAG4 269 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 FBXW10Q5XX13 1052 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 LBX2Q6XYB7 198 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SPOCD1Q6ZMY3 1216 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 PLPPR4Q7Z2D5 763 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SPATA21Q7Z572 469 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ERICH1Q86X53 443 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 FUKQ8N0W3 1084 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ASAP3Q8TDY4 903 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ZNF606Q8WXB4 792 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 APBB2Q92870 758 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 TMEM143Q96AN5 459 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 FAM212AQ96EL1 285 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 RAB3IPQ96QF0 476 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SMC6Q96SB8 1091 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 RBM15Q96T37 977 aaKnown RBP eCLIP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ELAC2Q9BQ52 826 aaKnown RBP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 TARS2Q9BW92 718 aaKnown RBP9.34□□□□□ -0.91
HDAC3-202ENST00000459727 NFKBIZQ9BYH8 718 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 DNAI2Q9GZS0 605 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 CYP3A43Q9HB55 503 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ACP6Q9NPH0 428 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 ZNF148Q9UQR1 794 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
HDAC3-202ENST00000459727 SIGLEC16A6NMB1 481 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 RASA4BC9J798 803 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 TP73O15350 636 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 MAGEB2O15479 319 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 RASA4O43374 803 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 LGR5O75473 907 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ZNF189O75820 626 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 DCTN3O75935 186 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 TOMM70O94826 608 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 FARP2O94887 1054 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ZWINTO95229 277 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 PRKCBP05771 671 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 UBA1P22314 1058 aaKnown RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 RASSF2P50749 326 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ARL4CP56559 192 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 LACTBP83111 547 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 SP4Q02446 784 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 RNASELQ05823 741 aaKnown RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 CAPSQ13938 189 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 SETDB1Q15047 1291 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 STILQ15468 1287 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ZNF699Q32M78 642 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 P3H1Q32P28 736 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 MPZL3Q6UWV2 235 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 C4orf22Q6V702 233 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 TRMT1LQ7Z2T5 733 aaKnown RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 APBB1IPQ7Z5R6 666 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 VSIG1Q86XK7 387 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 PPIL6Q8IXY8 311 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ATP11CQ8NB49 1132 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ZNF398Q8TD17 642 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ATG4AQ8WYN0 398 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 ANKRD27Q96NW4 1050 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 TGS1Q96RS0 853 aaKnown RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 TCHPQ9BT92 498 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 DDX23Q9BUQ8 820 aaKnown RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 APOBEC3GQ9HC16 384 aaKnown RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 KCNK9Q9NPC2 374 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.929e-15■■■■■ 186.3
HDAC3-202ENST00000459727 CISHQ9NSE2 258 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 TXLNGQ9NUQ3 528 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 PSMC3IPQ9P2W1 217 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 CHORDC1Q9UHD1 332 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 CPSF3Q9UKF6 684 aaKnown RBP9.33□□□□□ -0.92
HDAC3-202ENST00000459727 KIAA1257Q9ULG3 409 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 AGTPBP1Q9UPW5 1226 aa9.33□□□□□ -0.92
HDAC3-202ENST00000459727 USTQ9Y2C2 406 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms