RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ATAD1Q8NBU5 361 aa11.32□□□□□ -0.6
HDLBP-227ENST00000458564 BICD1Q96G01 975 aa11.32□□□□□ -0.6
HDLBP-227ENST00000458564 RBM12Q9NTZ6 932 aaKnown RBP11.32□□□□□ -0.6
HDLBP-227ENST00000458564 ZMYM5Q9UJ78 669 aa11.32□□□□□ -0.6
HDLBP-227ENST00000458564 DERAQ9Y315 318 aa11.32□□□□□ -0.6
HDLBP-227ENST00000458564 TSC2P49815 1807 aa11.32□□□□□ -0.6
HDLBP-227ENST00000458564 CNOT1A5YKK6 2376 aaKnown RBP11.32□□□□□ -0.6
HDLBP-227ENST00000458564 A0A0B4J269 797 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 CCDC163A0A0D9SF12 145 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 PIRO00625 290 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 DPYSL4O14531 572 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 PPEF2O14830 753 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 PRAMEF12O95522 483 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 GABRR2P28476 465 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 CDC25CP30307 473 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 MATR3P43243 847 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 TUFMP49411 452 aaKnown RBP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 LIG4P49917 911 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 SMARCB1Q12824 385 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 ZRSR1Q15695 479 aaKnown RBP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 ARHGAP15Q53QZ3 475 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 ARMCX5Q6P1M9 558 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 WDR5BQ86VZ2 330 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 FAM200AQ8TCP9 573 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 BPIFB1Q8TDL5 484 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 SENP8Q96LD8 212 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 AK8Q96MA6 479 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 KIF2CQ99661 725 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 ATXN3LQ9H3M9 355 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 TASP1Q9H6P5 420 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 C2orf42Q9NWW7 574 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 GTSE1Q9NYZ3 720 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 KIF26AQ9ULI4 1882 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-227ENST00000458564 USP24Q9UPU5 2620 aa11.31□□□□□ -0.6
HDLBP-227ENST00000458564 MYH11P35749 1972 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 NPHP3-ACAD11A0A0J9YXS1 232 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 SOAT2O75908 522 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 NEFLP07196 543 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 ATF6P18850 670 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 ABCD1P33897 745 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 MCM2P49736 904 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 LIMK1P53667 647 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 POU5F1Q01860 360 aaKnown RBP11.3□□□□□ -0.6
HDLBP-227ENST00000458564 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-227ENST00000458564 SRSF5Q13243 272 aaKnown RBP11.3□□□□□ -0.6
HDLBP-227ENST00000458564 VEPH1Q14D04 833 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 PON2Q15165 354 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 PPM1JQ5JR12 505 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 C9orf57Q5W0N0 161 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 JADE1Q6IE81 842 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 SLC39A4Q6P5W5 647 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 FAM160A2Q8N612 972 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-227ENST00000458564 C2orf15Q8WU43 125 aaKnown RBP11.3□□□□□ -0.6
HDLBP-227ENST00000458564 DDX1Q92499 740 aaKnown RBP11.3□□□□□ -0.6
HDLBP-227ENST00000458564 CDK5RAP3Q96JB5 506 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 ZFYVE19Q96K21 471 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 PARVGQ9HBI0 331 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 DSEQ9UL01 958 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 C2CD2Q9Y426 696 aa11.3□□□□□ -0.6
HDLBP-227ENST00000458564 VWA3AA6NCI4 1184 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 K7ENM7 598 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 KRT37O76014 449 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 NFICP08651 508 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 TNK2Q07912 1038 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 TMEM132DQ14C87 1099 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 ITPRIPL2Q3MIP1 535 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 SPPL2BQ8TCT7 592 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 LOXL4Q96JB6 756 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 GCNAQ96QF7 691 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-227ENST00000458564 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 FAM83CQ9BQN1 747 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 ASB7Q9H672 318 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 THG1LQ9NWX6 298 aaKnown RBP11.29□□□□□ -0.6
HDLBP-227ENST00000458564 LAMA1P25391 3075 aa11.29□□□□□ -0.6
HDLBP-227ENST00000458564 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 TRAK2O60296 914 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 GDF9O60383 454 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 AKAP3O75969 853 aa11.28□□□□□ -0.6
HDLBP-227ENST00000458564 DDX6P26196 483 aaKnown RBP eCLIP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms