RNA–Protein interactions for RNA: ENST00000457648.1

CKMT1A-205, Transcript of creatine kinase, mitochondrial 1A, human

TSL 5

Gene CKMT1A, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKMT1A-205	ENST00000457648	PLCB2	Q00722	1185 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	RAD51AP2	Q09MP3	1159 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	CSRP2	Q16527	193 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	STXBP5	Q5T5C0	1151 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	ERICH6B	Q5W0A0	696 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	DSTYK	Q6XUX3	929 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	ITIH5	Q86UX2	942 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	ATAD1	Q8NBU5	361 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	SENP8	Q96LD8	212 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	ZMYM5	Q9UJ78	669 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	CPSF3	Q9UKF6	684 aa	Known RBP	13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	TBX20	Q9UMR3	447 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	DERA	Q9Y315	318 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	FRY	Q5TBA9	3013 aa		13.21	□□□□□ -0.29
CKMT1A-205	ENST00000457648	PIR	O00625	290 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	PPEF2	O14830	753 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	HNRNPDL	O14979	420 aa	Known RBP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ADRB1	P08588	477 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ABCD1	P33897	745 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	MATR3	P43243	847 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SOX9	P48436	509 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	LIG4	P49917	911 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	KPNA1	P52294	538 aa	Predicted RBP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	POU5F1	Q01860	360 aa	Known RBP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	DMWD	Q09019	674 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SIM2	Q14190	667 aa	Predicted RBP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	C9orf57	Q5W0N0	161 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	PRR23C	Q6ZRP0	262 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648		Q6ZS52	159 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	WDR5B	Q86VZ2	330 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	TTC9B	Q8N6N2	239 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	OR10T2	Q8NGX3	314 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	BICD1	Q96G01	975 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	AK8	Q96MA6	479 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	TMEM209	Q96SK2	561 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	FIZ1	Q96SL8	496 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	CCSER1	Q9C0I3	900 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ZCWPW1	Q9H0M4	648 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	TASP1	Q9H6P5	420 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	RPF1	Q9H9Y2	349 aa	Known RBP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	IL21	Q9HBE4	155 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SEMA4G	Q9NTN9	838 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	RBM12	Q9NTZ6	932 aa	Known RBP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SLC27A5	Q9Y2P5	690 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	KIF3A	Q9Y496	699 aa		13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.2	□□□□□ -0.3
CKMT1A-205	ENST00000457648	KIAA1549L	Q6ZVL6	1849 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	DCDC2B	A2VCK2	349 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	VWA3A	A6NCI4	1184 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	CHURC1-FNTB	B4DL54	471 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	PRAMEF12	O95522	483 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	NEFL	P07196	543 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	GABRR2	P28476	465 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	FNTB	P49356	437 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	TUFM	P49411	452 aa	Known RBP	13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	GUCY2F	P51841	1108 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	CACNB1	Q02641	598 aa	Predicted RBP	13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SMARCB1	Q12824	385 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ZRSR1	Q15695	479 aa	Known RBP	13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	LPAL2	Q16609	132 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ARHGAP15	Q53QZ3	475 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	GPR158	Q5T848	1215 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	JADE1	Q6IE81	842 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ARMCX5	Q6P1M9	558 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SLC39A4	Q6P5W5	647 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	PRR23B	Q6ZRT6	265 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	BPIFB1	Q8TDL5	484 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	C2orf15	Q8WU43	125 aa	Known RBP	13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	CDK5RAP3	Q96JB5	506 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	REEP2	Q9BRK0	252 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ATXN3L	Q9H3M9	355 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ASB7	Q9H672	318 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	GTSE1	Q9NYZ3	720 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	DSE	Q9UL01	958 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	C2CD2	Q9Y426	696 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SDK1	Q7Z5N4	2213 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	MYO16	Q9Y6X6	1858 aa		13.19	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ZZEF1	O43149	2961 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	CCDC163	A0A0D9SF12	145 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SOBP	A7XYQ1	873 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	DPYSL4	O14531	572 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	SOAT2	O75908	522 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	NFIC	P08651	508 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ATF6	P18850	670 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	CDC25C	P30307	473 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	MCM2	P49736	904 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	LIMK1	P53667	647 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	GTF2B	Q00403	316 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	TMEM132D	Q14C87	1099 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	VEPH1	Q14D04	833 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	LRRC15	Q8TF66	581 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ZFYVE19	Q96K21	471 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	PLIN2	Q99541	437 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	MSTO1	Q9BUK6	570 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	ST6GALNAC4	Q9H4F1	302 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	PARVG	Q9HBI0	331 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	BLOC1S4	Q9NUP1	217 aa		13.18	□□□□□ -0.3
CKMT1A-205	ENST00000457648	C2orf42	Q9NWW7	574 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms