RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 SORCS3Q9UPU3 1222 aa19.43■□□□□ 0.7
PDLIM2-215ENST00000456545 SLC27A5Q9Y2P5 690 aa19.43■□□□□ 0.7
PDLIM2-215ENST00000456545 MRPS23Q9Y3D9 190 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-215ENST00000456545 PCDHA5Q9Y5H7 936 aa19.43■□□□□ 0.7
PDLIM2-215ENST00000456545 PTPRJQ12913 1337 aa19.43■□□□□ 0.7
PDLIM2-215ENST00000456545 KRT13P13646 458 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 EPHB3P54753 998 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 ZXDAP98168 799 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 ADAM9Q13443 819 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 MTMR3Q13615 1198 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 CYP4A22Q5TCH4 519 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 SMYD4Q8IYR2 804 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 PDCL2Q8N4E4 241 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 TOP6BLQ8N6T0 577 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 FAM200AQ8TCP9 573 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 ERCC4Q92889 916 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 MYADMQ96S97 322 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 TSG101Q99816 390 aa19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 DDX43Q9NXZ2 648 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 ZFP37Q9Y6Q3 630 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-215ENST00000456545 ZNF197O14709 1029 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 GPR37L1O60883 481 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 CST3P01034 146 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 RHOP08100 348 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 LHX1P48742 406 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 TUFMP49411 452 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 CASP4P49662 377 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 TNNC1P63316 161 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 SMARCB1Q12824 385 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 STIM1Q13586 685 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 SCARA3Q6AZY7 606 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 CENPPQ6IPU0 288 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 DPH6Q7L8W6 267 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 ADGRF2Q8IZF7 708 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 ATAD1Q8NBU5 361 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 OR10T2Q8NGX3 314 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 PARD3BQ8TEW8 1205 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 ZNF516Q92618 1163 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 ZCWPW1Q9H0M4 648 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 IGSF9Q9P2J2 1179 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 L1RE1Q9UN81 338 aa19.41■□□□□ 0.7
PDLIM2-215ENST00000456545 MYO10Q9HD67 2058 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 DENND4AQ7Z401 1863 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 MTMR11A4FU01 709 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 LAMP2P13473 410 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 PCSK1P29120 753 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 PSMC2P35998 433 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 PRCPP42785 496 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 CDR1P51861 262 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 UBE2HP62256 183 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 TAF12Q16514 161 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 MGAT5BQ3V5L5 792 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 ISM2Q6H9L7 571 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 PDZD4Q76G19 769 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 ELOA2Q8IYF1 753 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 UBALD2Q8IYN6 164 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 CXorf38Q8TB03 319 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 C2orf15Q8WU43 125 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 TMEM174Q8WUU8 243 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 SYAP1Q96A49 352 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 SEPT5Q99719 369 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 ACBD6Q9BR61 282 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 KCNK12Q9HB15 430 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 EPS15L1Q9UBC2 864 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 CDH7Q9ULB5 785 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 YIPF1Q9Y548 306 aa19.4■□□□□ 0.7
PDLIM2-215ENST00000456545 LRRIQ3A6PVS8 624 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 CETN3O15182 167 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 N4BP1O75113 896 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 MYL4P12829 197 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 ATICP31939 592 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 VAMP7P51809 220 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 TDGQ13569 410 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 NFE2Q16621 373 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 NFIL3Q16649 462 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 WDR72Q3MJ13 1102 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 TRIM67Q6ZTA4 783 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 FAM186BQ8IYM0 893 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 ITFG1Q8TB96 612 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 SPATA18Q8TC71 538 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 SPPL2BQ8TCT7 592 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 TMC2Q8TDI7 906 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 FGF13Q92913 245 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 NXPE3Q969Y0 559 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 RTP3Q9BQQ7 232 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 LRFN3Q9BTN0 628 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 SNX25Q9H3E2 840 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 ASAH2Q9NR71 780 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 ABI2Q9NYB9 513 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 NXF1Q9UBU9 619 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 PCDHB5Q9Y5E4 795 aa19.39■□□□□ 0.69
PDLIM2-215ENST00000456545 PRR33A8MZF0 331 aa19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 MAPK13O15264 365 aa19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 ACAT1P24752 427 aaKnown RBP19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 MYL6P60660 151 aa19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 SIGLEC14Q08ET2 396 aa19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 VEPH1Q14D04 833 aa19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 SOWAHAQ2M3V2 549 aa19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 EDRF1Q3B7T1 1238 aa19.38■□□□□ 0.69
PDLIM2-215ENST00000456545 INTS8Q75QN2 995 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms