RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 CYP2D6P10635 497 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 THRAP10827 490 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 MAP3K10Q02779 954 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 TJAP1Q5JTD0 557 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 ZBTB33Q86T24 672 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 PCYOX1LQ8NBM8 494 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 PSPC1Q8WXF1 523 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 MAP3K14Q99558 947 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 ANO3Q9BYT9 981 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 CEP44Q9C0F1 390 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 COPS7BQ9H9Q2 264 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 INTS13Q9NVM9 706 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 TELO2Q9Y4R8 837 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 AK5Q9Y6K8 562 aa12.9□□□□□ -0.34
NEDD4L-208ENST00000456173 XDHP47989 1333 aa12.9□□□□□ -0.35
NEDD4L-208ENST00000456173 UGGT1Q9NYU2 1555 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ZSCAN9O15535 394 aaPredicted RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 KCNN4O15554 427 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 PHGDHO43175 533 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 NPTXRO95502 500 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 GNA15P30679 374 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 NRF1Q16656 503 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 MFSD14BQ5SR56 506 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 CCNJLQ8IV13 435 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 DHX38Q92620 1227 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ASPSCR1Q9BZE9 553 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 MKL2Q9ULH7 1088 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 TBKBP1A7MCY6 615 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 GNPATO15228 680 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 PPIP5K2O43314 1243 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 MGRN1O60291 552 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ANPEPP15144 967 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 CDH6P55285 790 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 CCDC142Q17RM4 750 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 GPATCH4Q5T3I0 446 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 SETD3Q86TU7 594 aaPredicted RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 TDRKHQ9Y2W6 561 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 HADHAP40939 763 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 LUZP2Q86TE4 346 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 DGKHQ86XP1 1220 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 IGDCC4Q8TDY8 1250 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 CKAP2Q8WWK9 683 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 H0YC42 278 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 SNX2O60749 519 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 JAK1P23458 1154 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 CCNFP41002 786 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 IL12RB1P42701 662 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 PTENP60484 403 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ACTR2P61160 394 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 C6orf10Q5SRN2 563 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 RCOR2Q8IZ40 523 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ZNF75CPQ92670 426 aaPredicted RBP12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 SEMA6AQ9H2E6 1030 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 DSEQ9UL01 958 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 CPDO75976 1380 aa12.89□□□□□ -0.35
NEDD4L-208ENST00000456173 ATP9BO43861 1147 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 BFSP2Q13515 415 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TRADDQ15628 312 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 SRBD1Q8N5C6 995 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 FAM13CQ8NE31 585 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TSPAN14Q8NG11 270 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 LRRC39Q96DD0 335 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TASP1Q9H6P5 420 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 EFCAB1Q9HAE3 211 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 BFARQ9NZS9 450 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 PCDHA6Q9UN73 950 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 MRPL11Q9Y3B7 192 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 PCDHA8Q9Y5H6 950 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 CCDC78A2IDD5 438 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ALOX12P18054 663 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TAF12Q16514 161 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ARHGEF16Q5VV41 709 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ATG14Q6ZNE5 492 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TAGAPQ8N103 731 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ZNF713Q8N859 430 aaPredicted RBP12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 PAFAH2Q99487 392 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 ASNSD1Q9NWL6 643 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 NSMCE4AQ9NXX6 385 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 WHRNQ9P202 907 aa12.88□□□□□ -0.35
NEDD4L-208ENST00000456173 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms