RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GET4Q7L5D6 327 aaPredicted RBP18.66■□□□□ 0.58
USP39-208ENST00000455732 TRAPPC11Q7Z392 1133 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 SPATA18Q8TC71 538 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 SMARCE1Q969G3 411 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 PBXIP1Q96AQ6 731 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 CCDC127Q96BQ5 260 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 IGSF9Q9P2J2 1179 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 DNMT3BQ9UBC3 853 aaKnown RBP18.66■□□□□ 0.58
USP39-208ENST00000455732 PCDHA5Q9Y5H7 936 aa18.66■□□□□ 0.58
USP39-208ENST00000455732 TULP1O00294 542 aaPredicted RBP18.65■□□□□ 0.58
USP39-208ENST00000455732 SEC24AO95486 1093 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 KRT19P08727 400 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 TNNI1P19237 187 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 FSHRP23945 695 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 ELF1P32519 619 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 AP3M2P53677 418 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 MYO1EQ12965 1108 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 WSCD1Q658N2 575 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 SCARA3Q6AZY7 606 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 METTL23Q86XA0 190 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 OR10T2Q8NGX3 314 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 PLEKHO2Q8TD55 490 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 PARD3BQ8TEW8 1205 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 RTP3Q9BQQ7 232 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 HCFC1R1Q9NWW0 138 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 POLIQ9UNA4 740 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 MAPK8IP1Q9UQF2 711 aa18.65■□□□□ 0.58
USP39-208ENST00000455732 R3HCC1Q9Y3T6 440 aaKnown RBP18.65■□□□□ 0.58
USP39-208ENST00000455732 PRRG1O14668 218 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 NR2F2P24468 414 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 ENPEPQ07075 957 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 ADCY1Q08828 1119 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 BFSP1Q12934 665 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 TDGQ13569 410 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 EDRF1Q3B7T1 1238 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 RNF19BQ6ZMZ0 732 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 CLEC17AQ6ZS10 378 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 SMYD4Q8IYR2 804 aaPredicted RBP18.64■□□□□ 0.57
USP39-208ENST00000455732 TMEM86AQ8N2M4 240 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 PDCL2Q8N4E4 241 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 TOP6BLQ8N6T0 577 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 TMC2Q8TDI7 906 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 ZCWPW1Q9H0M4 648 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 CYP4F11Q9HBI6 524 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 L1RE1Q9UN81 338 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 INSL5Q9Y5Q6 135 aa18.64■□□□□ 0.57
USP39-208ENST00000455732 ZFP37Q9Y6Q3 630 aaPredicted RBP18.64■□□□□ 0.57
USP39-208ENST00000455732 LRRIQ3A6PVS8 624 aaPredicted RBP18.63■□□□□ 0.57
USP39-208ENST00000455732 HUS1O60921 280 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 VNN2O95498 520 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 STAU1O95793 577 aaKnown RBP18.63■□□□□ 0.57
USP39-208ENST00000455732 OR4Q2P0C623 313 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 RPL13P26373 211 aaKnown RBP18.63■□□□□ 0.57
USP39-208ENST00000455732 CASP4P49662 377 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 SMARCB1Q12824 385 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 DPH6Q7L8W6 267 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 THEM5Q8N1Q8 247 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 FBXL6Q8N531 539 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 RSAD2Q8WXG1 361 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 ZNF516Q92618 1163 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 ERCC4Q92889 916 aaPredicted RBP18.63■□□□□ 0.57
USP39-208ENST00000455732 NXPE3Q969Y0 559 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 HPDLQ96IR7 371 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 AVENQ9NQS1 362 aaPredicted RBP18.63■□□□□ 0.57
USP39-208ENST00000455732 HSFX1Q9UBD0 423 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 CDH7Q9ULB5 785 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 DUSP12Q9UNI6 340 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 SNX9Q9Y5X1 595 aa18.63■□□□□ 0.57
USP39-208ENST00000455732 MTMR11A4FU01 709 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 ANHXE9PGG2 379 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 AKAP3O75969 853 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 PDGFBP01127 241 aaPredicted RBP18.62■□□□□ 0.57
USP39-208ENST00000455732 LRG1P02750 347 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 PRCPP42785 496 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 NHLH1Q02575 133 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 HTR4Q13639 388 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 PABPC1LQ4VXU2 614 aaKnown RBP18.62■□□□□ 0.57
USP39-208ENST00000455732 CEP135Q66GS9 1140 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 CENPPQ6IPU0 288 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 SUGP1Q8IWZ8 645 aaKnown RBP18.62■□□□□ 0.57
USP39-208ENST00000455732 ITFG1Q8TB96 612 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 FGF13Q92913 245 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 TMEM209Q96SK2 561 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 YIPF1Q9Y548 306 aa18.62■□□□□ 0.57
USP39-208ENST00000455732 GABRDO14764 452 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 IKBKBO14920 756 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 RHOP08100 348 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 ATICP31939 592 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 MCCD1P59942 119 aaPredicted RBP18.61■□□□□ 0.57
USP39-208ENST00000455732 PLD1Q13393 1074 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 SOWAHAQ2M3V2 549 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 INTS8Q75QN2 995 aaKnown RBP18.61■□□□□ 0.57
USP39-208ENST00000455732 ALYREFQ86V81 257 aaKnown RBP18.61■□□□□ 0.57
USP39-208ENST00000455732 ADSSL1Q8N142 457 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 SLC44A3Q8N4M1 653 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 C2orf15Q8WU43 125 aaKnown RBP18.61■□□□□ 0.57
USP39-208ENST00000455732 PGLYRP2Q96PD5 576 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 MKNK1Q9BUB5 465 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms