RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ZNF484Q5JVG2 852 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 ERMARDQ5T6L9 678 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 DNAJC24Q6P3W2 148 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 THNSL1Q8IYQ7 743 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 ZC3H15Q8WU90 426 aaKnown RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 CCDC114Q96M63 670 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 NLRP4Q96MN2 994 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 LHX5Q9H2C1 402 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 PRMT7Q9NVM4 692 aaPredicted RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 ADCY8P40145 1251 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 ZNF252P-AS1Q0IIN9 211 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 CCDC25Q86WR0 208 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 ERICH1Q86X53 443 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 IFNLR1Q8IU57 520 aaPredicted RBP15.95■□□□□ 0.14
LDLR-202ENST00000455727 RELL1Q8IUW5 271 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 TRAPPC12Q8WVT3 735 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 TFAP2BQ92481 460 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 COPS5Q92905 334 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 OPTNQ96CV9 577 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 SLITRK1Q96PX8 696 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 FOXP3Q9BZS1 431 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 CDT1Q9H211 546 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 RPF1Q9H9Y2 349 aaKnown RBP15.95■□□□□ 0.14
LDLR-202ENST00000455727 ANAPC5Q9UJX4 755 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 STRIP2Q9ULQ0 834 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 C5orf60A6NFR6 353 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 TJP3O95049 919 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 GJB6O95452 261 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 C22orf31O95567 290 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 TTC4O95801 387 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 SSR1P43307 286 aaKnown RBP15.95■□□□□ 0.14
LDLR-202ENST00000455727 AUHQ13825 339 aaKnown RBP15.95■□□□□ 0.14
LDLR-202ENST00000455727 EEF1DP3Q658K8 133 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 DCUN1D2Q6PH85 259 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 MOB2Q70IA6 237 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 ZNF365Q70YC5 407 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 CCHCR1Q8TD31 782 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 PPM1EQ8WY54 764 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 SERPINB12Q96P63 405 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 MCEEQ96PE7 176 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 BCO2Q9BYV7 579 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 TMEM51Q9NW97 253 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 DDX56Q9NY93 547 aaKnown RBP15.95■□□□□ 0.14
LDLR-202ENST00000455727 RNF181Q9P0P0 153 aa15.95■□□□□ 0.14
LDLR-202ENST00000455727 B4GALT5O43286 388 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 MED7O43513 233 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 KLRC2P26717 231 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 POLR2BP30876 1174 aaKnown RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 TTLL12Q14166 644 aaPredicted RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 UBAP2Q5T6F2 1119 aaKnown RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 CEP128Q6ZU80 1094 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 USP50Q70EL3 339 aaPredicted RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 ANKS1BQ7Z6G8 1248 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 EPS8L3Q8TE67 593 aaKnown RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 XPO6Q96QU8 1125 aaKnown RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 ADAM7Q9H2U9 754 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 MEFVO15553 781 aaPredicted RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 TCEA3O75764 348 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 GJB1P08034 283 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 CHKAP35790 457 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 PHKA2P46019 1235 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 CLCN3P51790 818 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 IFI35P80217 286 aaPredicted RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 LACTBP83111 547 aaPredicted RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 TNFAIP2Q03169 654 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 SLC20A2Q08357 652 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 LAMC2Q13753 1193 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 TMEM132AQ24JP5 1023 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 TAOK1Q7L7X3 1001 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 GTF3C2Q8WUA4 911 aaPredicted RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 RNPEPQ9H4A4 650 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 MINDY3Q9H8M7 445 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 IFT122Q9HBG6 1241 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 PDGFCQ9NRA1 345 aa15.94■□□□□ 0.14
LDLR-202ENST00000455727 DRG1Q9Y295 367 aaKnown RBP15.94■□□□□ 0.14
LDLR-202ENST00000455727 PLXNA1Q9UIW2 1896 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 ANKRD65E5RJM6 399 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 MAGEB2O15479 319 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 LIASO43766 372 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 MCF2P10911 925 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 OGDHQ02218 1023 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 ARHGAP1Q07960 439 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 ZNF667Q5HYK9 610 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 POLNQ7Z5Q5 900 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 CEP120Q8N960 986 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 IVNS1ABPQ9Y6Y0 642 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 F8VP50 259 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 IQCF3P0C7M6 154 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 CHN1P15882 459 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 GSCP56915 257 aaPredicted RBP15.93■□□□□ 0.14
LDLR-202ENST00000455727 OSTNP61366 133 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 TRIP13Q15645 432 aaPredicted RBP15.93■□□□□ 0.14
LDLR-202ENST00000455727 KYAT1Q16773 422 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 ATP13A4Q4VNC1 1196 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 TMEM63BQ5T3F8 832 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 WDR78Q5VTH9 848 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 C6orf89Q6UWU4 347 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 SPOCD1Q6ZMY3 1216 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms