RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 PABPC1LQ4VXU2 614 aaKnown RBP3.03□□□□□ -1.92
LINC02540-201ENST00000455554 TAPT1Q6NXT6 567 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 CNGA4Q8IV77 575 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 FAM9AQ8IZU1 332 aaPredicted RBP3.03□□□□□ -1.92
LINC02540-201ENST00000455554 GALNT16Q8N428 558 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 FANCBQ8NB91 859 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 SSH1Q8WYL5 1049 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 CAMKK2Q96RR4 588 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 C7orf25Q9BPX7 421 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 IMPG2Q9BZV3 1241 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 IFT22Q9H7X7 185 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 VTA1Q9NP79 307 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 ARHGEF3Q9NR81 526 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 JKAMPQ9P055 326 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 DKK3Q9UBP4 350 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 DNM3Q9UQ16 869 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 AFG3L2Q9Y4W6 797 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 PCDHGA2Q9Y5H1 932 aa3.03□□□□□ -1.92
LINC02540-201ENST00000455554 NOTCH4Q99466 2003 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 SPATA31A3Q5VYP0 1347 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 F5H697 171 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 SOCS2O14508 198 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 ZNF213O14771 459 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 ADAMTS3O15072 1205 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 TRIAP1O43715 76 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 DNAJB5O75953 348 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 NXPH3O95157 252 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 HMGB1P09429 215 aaKnown RBP3.02□□□□□ -1.93
LINC02540-201ENST00000455554 JUPP14923 745 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 SCAND1P57086 179 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 DAZAP2Q15038 168 aaPredicted RBP3.02□□□□□ -1.93
LINC02540-201ENST00000455554 LRRC41Q15345 812 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 DLK2Q6UY11 383 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 CATSPERGQ6ZRH7 1159 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 ZNF365Q70YC5 407 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 MEPCEQ7L2J0 689 aaKnown RBP3.02□□□□□ -1.93
LINC02540-201ENST00000455554 ZNF804AQ7Z570 1209 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 TMIEQ8NEW7 156 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 PRSS3P2Q8NHM4 247 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 FBXO41Q8TF61 875 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 NSMCE1Q8WV22 266 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 UBXN4Q92575 508 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 MARK4Q96L34 752 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 PUS7Q96PZ0 661 aaKnown RBP3.02□□□□□ -1.93
LINC02540-201ENST00000455554 TRIB1Q96RU8 372 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 TTC1Q99614 292 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 SMOQ99835 787 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 PACSIN1Q9BY11 444 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 ACTRT3Q9BYD9 372 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 VPS33BQ9H267 617 aa3.02□□□□□ -1.93
LINC02540-201ENST00000455554 APOBEC2Q9Y235 224 aaKnown RBP3.02□□□□□ -1.93
LINC02540-201ENST00000455554 PDE8AO60658 829 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 SLC43A1O75387 559 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 MYCLP1P12525 358 aaPredicted RBP3.01□□□□□ -1.93
LINC02540-201ENST00000455554 NDUFV1P49821 464 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 TBCCQ15814 346 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 FLYWCH1Q4VC44 716 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 AARS2Q5JTZ9 985 aaKnown RBP3.01□□□□□ -1.93
LINC02540-201ENST00000455554 ANKRD16Q6P6B7 361 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 STRA8Q7Z7C7 330 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 KIAA0907Q7Z7F0 614 aaPredicted RBP3.01□□□□□ -1.93
LINC02540-201ENST00000455554 RHOT1Q8IXI2 618 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 NANOGP1Q8N7R0 232 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 IL17RDQ8NFM7 739 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 POC1BQ8TC44 478 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 ATRIPQ8WXE1 791 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 TMX3Q96JJ7 454 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 OSBPL9Q96SU4 736 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 TRNAU1APQ9NX07 287 aaKnown RBP3.01□□□□□ -1.93
LINC02540-201ENST00000455554 DNAJC28Q9NX36 388 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 SLC45A2Q9UMX9 530 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 MAPRE3Q9UPY8 281 aa3.01□□□□□ -1.93
LINC02540-201ENST00000455554 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.01□□□□□ -1.93
LINC02540-201ENST00000455554 MRPL42Q9Y6G3 142 aaKnown RBP3.01□□□□□ -1.93
LINC02540-201ENST00000455554 CDC45O75419 566 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 Q4G0T1 1027 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 IRF2BP2Q7Z5L9 587 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 MRPL10Q7Z7H8 261 aaKnown RBP3□□□□□ -1.93
LINC02540-201ENST00000455554 RSPH3Q86UC2 560 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 JAZF1Q86VZ6 243 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 AOPEPQ8N6M6 819 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 NRACQ8N912 160 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 PNLDC1Q8NA58 520 aaKnown RBP3□□□□□ -1.93
LINC02540-201ENST00000455554 C8orf58Q8NAV2 365 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 SLC17A8Q8NDX2 589 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 DPF2Q92785 391 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 C5orf34Q96MH7 638 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 AMBRA1Q9C0C7 1298 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 PDGFCQ9NRA1 345 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 ZNF112Q9UJU3 913 aa3□□□□□ -1.93
LINC02540-201ENST00000455554 FAM90A10PA6NDY2 464 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 E5RJQ4 531 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 H0YIZ8 118 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 QSOX1O00391 747 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 POLRMTO00411 1230 aaKnown RBP2.99□□□□□ -1.93
LINC02540-201ENST00000455554 BCAR3O75815 825 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 ANXA1P04083 346 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 OSMP13725 252 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 SCP2P22307 547 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 ALDH9A1P49189 494 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms