RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TSPAN18Q96SJ8 248 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 SEMA4AQ9H3S1 761 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 ASB7Q9H672 318 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 C2orf42Q9NWW7 574 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 NDRG2Q9UN36 371 aaKnown RBP17.37■□□□□ 0.37
GPC1-206ENST00000455111 C2CD2Q9Y426 696 aa17.37■□□□□ 0.37
GPC1-206ENST00000455111 LAMTOR5O43504 91 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 HCRTO43612 131 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 CHRNB1P11230 501 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 ODC1P11926 461 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 SCP2P22307 547 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 CYP4F8P98187 520 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 FCHO2Q0JRZ9 810 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 SLC39A12Q504Y0 691 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 WSCD1Q658N2 575 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 USP37Q86T82 979 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 KIAA2013Q8IYS2 634 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 LEMD2Q8NC56 503 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 KCNG4Q8TDN1 519 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 CHFRQ96EP1 664 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 SAAL1Q96ER3 474 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 ZFYVE19Q96K21 471 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 OXCT2Q9BYC2 517 aaPredicted RBP17.36■□□□□ 0.37
GPC1-206ENST00000455111 CHRDQ9H2X0 955 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 DPP3Q9NY33 737 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 PIAS3Q9Y6X2 628 aa17.36■□□□□ 0.37
GPC1-206ENST00000455111 ANAPC1Q9H1A4 1944 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 CYB561D2O14569 222 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 XPOTO43592 962 aaKnown RBP17.35■□□□□ 0.37
GPC1-206ENST00000455111 ID4P47928 161 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 GPR15P49685 360 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 ARID3BQ8IVW6 561 aaPredicted RBP17.35■□□□□ 0.37
GPC1-206ENST00000455111 ELMOD1Q8N336 334 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 RASSF8Q8NHQ8 419 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 DEPDC1BQ8WUY9 529 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 FAM3CQ92520 227 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 IRF7Q92985 503 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 PYM1Q9BRP8 204 aaKnown RBP17.35■□□□□ 0.37
GPC1-206ENST00000455111 PANK2Q9BZ23 570 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 SMG9Q9H0W8 520 aaKnown RBP17.35■□□□□ 0.37
GPC1-206ENST00000455111 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 STK17AQ9UEE5 414 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 PTPRDP23468 1912 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 GPR179Q6PRD1 2367 aa17.35■□□□□ 0.37
GPC1-206ENST00000455111 EP300Q09472 2414 aaPredicted RBP17.35■□□□□ 0.37
GPC1-206ENST00000455111 F5P12259 2224 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 TGM1P22735 817 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 CCNE1P24864 410 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 GABRR2P28476 465 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 HOXD13P35453 343 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 MAGEA9P43362 315 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 EPHB3P54753 998 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 DMWDQ09019 674 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 PTPRJQ12913 1337 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 L1TD1Q5T7N2 865 aaKnown RBP17.34■□□□□ 0.37
GPC1-206ENST00000455111 KIAA1549LQ6ZVL6 1849 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 C1orf127Q8N9H9 656 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
GPC1-206ENST00000455111 TTC8Q8TAM2 541 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 HPS3Q969F9 1004 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 HVCN1Q96D96 273 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 NELL2Q99435 816 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 PKMYT1Q99640 499 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 CBWD1Q9BRT8 395 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 RBM12Q9NTZ6 932 aaKnown RBP17.34■□□□□ 0.37
GPC1-206ENST00000455111 MYO16Q9Y6X6 1858 aa17.34■□□□□ 0.37
GPC1-206ENST00000455111 MORC2Q9Y6X9 1032 aaPredicted RBP17.34■□□□□ 0.37
GPC1-206ENST00000455111 GOLGA8IPA6NC78 632 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 GOLGA8JA6NMD2 632 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 SLC38A8A6NNN8 435 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 HAPLN1P10915 354 aaPredicted RBP17.33■□□□□ 0.36
GPC1-206ENST00000455111 HMGA1P17096 107 aaKnown RBP17.33■□□□□ 0.36
GPC1-206ENST00000455111 TAF6P49848 677 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 SLC39A14Q15043 492 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 RRAGBQ5VZM2 374 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 SLFN12LQ6IEE8 588 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 BRSK2Q8IWQ3 736 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 GIPC2Q8TF65 315 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 POMGNT1Q8WZA1 660 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 SEPT5Q99719 369 aaPredicted RBP17.33■□□□□ 0.36
GPC1-206ENST00000455111 FAM213AQ9BRX8 229 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 SLC46A2Q9BY10 475 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 ATXN3LQ9H3M9 355 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 MRPL44Q9H9J2 332 aaKnown RBP17.33■□□□□ 0.36
GPC1-206ENST00000455111 LMAN1LQ9HAT1 526 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.36
GPC1-206ENST00000455111 GTSE1Q9NYZ3 720 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 HSFX1Q9UBD0 423 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 SIX4Q9UIU6 781 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 L1RE1Q9UN81 338 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.36
GPC1-206ENST00000455111 EML5Q05BV3 1969 aa17.33■□□□□ 0.36
GPC1-206ENST00000455111 ZNF638Q14966 1978 aaKnown RBP17.33■□□□□ 0.36
GPC1-206ENST00000455111 KPNA7A9QM74 516 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 ZNF263O14978 683 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 CHADO15335 359 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 KINO60870 393 aaKnown RBP17.32■□□□□ 0.36
GPC1-206ENST00000455111 TADA3O75528 432 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 PRPF6O94906 941 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms