RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 KHSRPQ92945 711 aaKnown RBP eCLIP15.77■□□□□ 0.12
VPS16-205ENST00000453689 CCDC127Q96BQ5 260 aa15.77■□□□□ 0.12
VPS16-205ENST00000453689 CEP63Q96MT8 703 aa15.77■□□□□ 0.12
VPS16-205ENST00000453689 MKNK1Q9BUB5 465 aa15.77■□□□□ 0.12
VPS16-205ENST00000453689 RHOBTB2Q9BYZ6 727 aa15.77■□□□□ 0.12
VPS16-205ENST00000453689 PRKD2Q9BZL6 878 aa15.77■□□□□ 0.12
VPS16-205ENST00000453689 NAT10Q9H0A0 1025 aaKnown RBP15.77■□□□□ 0.12
VPS16-205ENST00000453689 FRMD4BQ9Y2L6 1034 aa15.77■□□□□ 0.12
VPS16-205ENST00000453689 OBSL1O75147 1896 aa15.77■□□□□ 0.11
VPS16-205ENST00000453689 SLC16A3O15427 465 aaKnown RBP15.76■□□□□ 0.11
VPS16-205ENST00000453689 FGFR1OPO95684 399 aaKnown RBP15.76■□□□□ 0.11
VPS16-205ENST00000453689 HNRNPA1P09651 372 aaKnown RBP eCLIP15.76■□□□□ 0.11
VPS16-205ENST00000453689 CPB1P15086 417 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 ATF2P15336 505 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 HOXA9P31269 272 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 RBP5P82980 135 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 TRAPPC11Q7Z392 1133 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 PARD3BQ8TEW8 1205 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 ZNF516Q92618 1163 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 MED15Q96RN5 788 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 OXCT2Q9BYC2 517 aaPredicted RBP15.76■□□□□ 0.11
VPS16-205ENST00000453689 PIDD1Q9HB75 910 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 DSEQ9UL01 958 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 TTC28Q96AY4 2481 aa15.76■□□□□ 0.11
VPS16-205ENST00000453689 OR6C75A6NL08 312 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 MAPK13O15264 365 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 AKAP3O75969 853 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 SEC24AO95486 1093 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 OR4Q2P0C623 313 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 EPB41P11171 864 aaKnown RBP15.75■□□□□ 0.11
VPS16-205ENST00000453689 PSMC2P35998 433 aaKnown RBP15.75■□□□□ 0.11
VPS16-205ENST00000453689 ZNF445P59923 1031 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 TPD52L1Q16890 204 aaPredicted RBP15.75■□□□□ 0.11
VPS16-205ENST00000453689 UVSSAQ2YD98 709 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 WSCD1Q658N2 575 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 TPGS2Q68CL5 300 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 LRSAM1Q6UWE0 723 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 RNF19BQ6ZMZ0 732 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 CCDC149Q6ZUS6 474 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 METTL23Q86XA0 190 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 FAM186BQ8IYM0 893 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 ENOX1Q8TC92 643 aaKnown RBP15.75■□□□□ 0.11
VPS16-205ENST00000453689 TMEM209Q96SK2 561 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 BPIFA3Q9BQP9 254 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 RTP3Q9BQQ7 232 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 GDAP2Q9NXN4 497 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 AFF4Q9UHB7 1163 aaKnown RBP15.75■□□□□ 0.11
VPS16-205ENST00000453689 NR2E1Q9Y466 385 aa15.75■□□□□ 0.11
VPS16-205ENST00000453689 ZNF638Q14966 1978 aaKnown RBP15.75■□□□□ 0.11
VPS16-205ENST00000453689 CLUHO75153 1309 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 LRRIQ3A6PVS8 624 aaPredicted RBP15.74■□□□□ 0.11
VPS16-205ENST00000453689 C2CD4DB7Z1M9 353 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 CCL16O15467 120 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 VNN2O95498 520 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 CAVIN2O95810 425 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 CST3P01034 146 aaPredicted RBP15.74■□□□□ 0.11
VPS16-205ENST00000453689 ELF1P32519 619 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 CLDN10P78369 228 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 MYL5Q02045 173 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 ADCY1Q08828 1119 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 RTL10Q7L3V2 364 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 RNF135Q8IUD6 432 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 TCEAL8Q8IYN2 117 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 OR10T2Q8NGX3 314 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 EEF2KMTQ96G04 330 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 HPDLQ96IR7 371 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 CYP4F11Q9HBI6 524 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 WDR6Q9NNW5 1121 aaKnown RBP15.74■□□□□ 0.11
VPS16-205ENST00000453689 L1RE1Q9UN81 338 aa15.74■□□□□ 0.11
VPS16-205ENST00000453689 R3HCC1Q9Y3T6 440 aaKnown RBP15.74■□□□□ 0.11
VPS16-205ENST00000453689 PRRG1O14668 218 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 HUS1O60921 280 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 GNA14O95837 355 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 POU2F2P09086 479 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 ZNF165P49910 485 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 DLG4P78352 724 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 ENPEPQ07075 957 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 INTS8Q75QN2 995 aaKnown RBP15.73■□□□□ 0.11
VPS16-205ENST00000453689 PDCL2Q8N4E4 241 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 TDRD5Q8NAT2 981 aaKnown RBP15.73■□□□□ 0.11
VPS16-205ENST00000453689 TMC2Q8TDI7 906 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 PGLYRP2Q96PD5 576 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 SRRTQ9BXP5 876 aaKnown RBP15.73■□□□□ 0.11
VPS16-205ENST00000453689 TSPY26PQ9H489 355 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 POLIQ9UNA4 740 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 USTQ9Y2C2 406 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 INSL5Q9Y5Q6 135 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 SNX9Q9Y5X1 595 aa15.73■□□□□ 0.11
VPS16-205ENST00000453689 CUL9Q8IWT3 2517 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 IKBKBO14920 756 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 XYLBO75191 536 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 KRT13P13646 458 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 NTHL1P78549 312 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 GPR17Q13304 367 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 SOWAHAQ2M3V2 549 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 CCDC40Q4G0X9 1142 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 TDRD10Q5VZ19 366 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms