RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 GPR158Q5T848 1215 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 HEATR6Q6AI08 1181 aaKnown RBP15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 DSTYKQ6XUX3 929 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 ZC3H10Q96K80 434 aaKnown RBP15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 PGLYRP2Q96PD5 576 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 TMEM209Q96SK2 561 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 ATXN3LQ9H3M9 355 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 KIF9Q9HAQ2 790 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 GTSE1Q9NYZ3 720 aa15.52■□□□□ 0.08
LYSMD3-202ENST00000453259 GDF9O60383 454 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 CYP11A1P05108 521 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 DDX6P26196 483 aaKnown RBP eCLIP15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 GABRR2P28476 465 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 SOX9P48436 509 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 GUCY1B3Q02153 619 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 GRSF1Q12849 480 aaKnown RBP eCLIP15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 KARSQ15046 597 aaKnown RBP15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 PON2Q15165 354 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 FBXO43Q4G163 708 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 TMEM196Q5HYL7 178 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 WDR44Q5JSH3 913 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 PLA2G2CQ5R387 149 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 HYIQ5T013 277 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 DTHD1Q6ZMT9 781 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 ZBTB45Q96K62 511 aaPredicted RBP15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 CRISPLD1Q9H336 500 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 LIMCH1Q9UPQ0 1083 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 DERAQ9Y315 318 aa15.51■□□□□ 0.07
LYSMD3-202ENST00000453259 TRDMT1O14717 391 aaKnown RBP15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 SLC26A4O43511 780 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 PIGRP01833 764 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 MATR3P43243 847 aaKnown RBP eCLIP15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 LILRA4P59901 499 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 SRSF5Q13243 272 aaKnown RBP15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 STXBP5Q5T5C0 1151 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 SPATA1Q5VX52 437 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 SYT2Q8N9I0 419 aaPredicted RBP15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 CCDC26Q8TAB7 109 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 LRRC3BQ96PB8 259 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 VPS45Q9NRW7 570 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 SLC8A2Q9UPR5 921 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 TIMM13Q9Y5L4 95 aaPredicted RBP15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 ZFHX4Q86UP3 3567 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 KIF26AQ9ULI4 1882 aaPredicted RBP15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 CHD6Q8TD26 2715 aa15.5■□□□□ 0.07
LYSMD3-202ENST00000453259 HNRNPDLO14979 420 aaKnown RBP15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 OGTO15294 1046 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 PRAMEF12O95522 483 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 OR4Q2P0C623 313 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 CCDC192P0DO97 292 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 DRD1P21728 446 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 CDC25AP30304 524 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 NCKAP1LP55160 1127 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 POU5F1Q01860 360 aaKnown RBP15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 ST3GAL1Q11201 340 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 STPG1Q5TH74 334 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 C11orf74Q86VG3 221 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 CMTM8Q8IZV2 173 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 FAM184AQ8NB25 1140 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 ATAD1Q8NBU5 361 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 SPPL2BQ8TCT7 592 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 BICD1Q96G01 975 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 FAM83CQ9BQN1 747 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 ARRDC1-AS1Q9H2J1 176 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 RPF1Q9H9Y2 349 aaKnown RBP15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 SLC27A5Q9Y2P5 690 aa15.49■□□□□ 0.07
LYSMD3-202ENST00000453259 CNOT1A5YKK6 2376 aaKnown RBP15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 FAM189A1O60320 539 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 AVPR1AP37288 418 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 LIG4P49917 911 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 RUNX3Q13761 415 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 ELF2Q15723 593 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 ENOX2Q16206 610 aaKnown RBP15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 TAF12Q16514 161 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 SEZ6Q53EL9 994 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 N4BP2L1Q5TBK1 243 aaPredicted RBP15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 METTL23Q86XA0 190 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 THEM5Q8N1Q8 247 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 ZFYVE19Q96K21 471 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 SENP8Q96LD8 212 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 ZSCAN31Q96LW9 406 aaPredicted RBP15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 MMTAG2Q9BU76 263 aaKnown RBP15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 LSM14BQ9BX40 385 aaKnown RBP15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 CCSER1Q9C0I3 900 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 ZCWPW1Q9H0M4 648 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 IL21Q9HBE4 155 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 SH2B1Q9NRF2 756 aaPredicted RBP15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 C2CD2Q9Y426 696 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 SPAG17Q6Q759 2223 aa15.48■□□□□ 0.07
LYSMD3-202ENST00000453259 SFI1A8K8P3 1242 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 LACTBL1A8MY62 500 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 AXIN1O15169 862 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 EXTL3O43909 919 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 MPLP40238 635 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 TNK2Q07912 1038 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 ZNF268Q14587 947 aaPredicted RBP15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 PDGFRLQ15198 375 aa15.47■□□□□ 0.07
LYSMD3-202ENST00000453259 SF3A2Q15428 464 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms