RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SBF1O95248 1867 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 KRT19P08727 400 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 GCKP35557 465 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 TRPC3Q13507 836 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 CRYMQ14894 314 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 DUOXA2Q1HG44 320 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 HHATQ5VTY9 493 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 DENND2CQ68D51 928 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-202ENST00000451716 CCDC62Q6P9F0 684 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 MDM1Q8TC05 714 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 TFAP2BQ92481 460 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 KCNN1Q92952 543 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 TRIM11Q96F44 468 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-202ENST00000451716 KIF9Q9HAQ2 790 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 MCM8Q9UJA3 840 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 CPSF3Q9UKF6 684 aaKnown RBP12.8□□□□□ -0.36
COL27A1-202ENST00000451716 POLIQ9UNA4 740 aa12.8□□□□□ -0.36
COL27A1-202ENST00000451716 DNAJC25-GNG10A0A024R161 153 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 TP73O15350 636 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 LGR5O75473 907 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 HOXC6P09630 235 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 CXCL8P10145 99 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 NAT1P18440 290 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 FNTAP49354 379 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 ATF7IP2Q5U623 682 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 C9orf131Q5VYM1 1079 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 KAZNQ674X7 775 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 TCP11Q8WWU5 503 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 LMCD1Q9NZU5 365 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 A0A0G2JMZ2 1700 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 IGKV6-21A0A0C4DH24 114 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 RBM47A0AV96 593 aaKnown RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 TMEM191BP0C7N4 346 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 KRT10P13645 584 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 GJA5P36382 358 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 SLC1A1P43005 524 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF132P52740 706 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 MCL1Q07820 350 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 PTGISQ16647 500 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 FBXW10Q5XX13 1052 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 PLEKHA7Q6IQ23 1121 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 GPAT2Q6NUI2 795 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 PHF13Q86YI8 300 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 MCEEQ96PE7 176 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 DDX23Q9BUQ8 820 aaKnown RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 MTRF1LQ9UGC7 380 aaKnown RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 SIP14410 1827 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 DICER1Q9UPY3 1922 aaKnown RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 E7EVH7 732 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 CHKAP35790 457 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 CDH8P55286 799 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF699Q32M78 642 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 MPZL3Q6UWV2 235 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 TRIM72Q6ZMU5 477 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 PLPPR4Q7Z2D5 763 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 C12orf50Q8NA57 414 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 EPS8L3Q8TE67 593 aaKnown RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 ART4Q93070 314 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 NIF3L1Q9GZT8 377 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 MRPL47Q9HD33 250 aaKnown RBP12.79□□□□□ -0.36
COL27A1-202ENST00000451716 TJP2Q9UDY2 1190 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 SLC12A6Q9UHW9 1150 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
COL27A1-202ENST00000451716 F8VP50 259 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 EBAG9O00559 213 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 MMP8P22894 467 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 IFI35P80217 286 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-202ENST00000451716 CALCOCO2Q13137 446 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 EMC10Q5UCC4 262 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 TXNRD3NBQ6F5E7 133 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 UBR7Q8N806 425 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-202ENST00000451716 FEZF2Q8TBJ5 459 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 DCLK3Q9C098 648 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 EPN3Q9H201 632 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 PARVAQ9NVD7 372 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 ACKR2O00590 384 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 SKAP2O75563 359 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-202ENST00000451716 ACSL3O95573 720 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL27A1-202ENST00000451716 OGDHQ02218 1023 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 PPIL2Q13356 520 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 SGSM1Q2NKQ1 1148 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 RHOT1Q8IXI2 618 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 WDTC1Q8N5D0 677 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 ARL10Q8N8L6 244 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
COL27A1-202ENST00000451716 YIPF2Q9BWQ6 316 aa12.78□□□□□ -0.36
COL27A1-202ENST00000451716 OSBPL8Q9BZF1 889 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms