RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
VPS33A-202ENST00000451053 CTXN3Q4LDR2 81 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 WDR44Q5JSH3 913 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 OVOS1Q6IE37 1185 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 RSPO2Q6UXX9 243 aaPredicted RBP13.96□□□□□ -0.17
VPS33A-202ENST00000451053 GBP6Q6ZN66 633 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 ANKS3Q6ZW76 656 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 GLYCTKQ8IVS8 523 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 GPR65Q8IYL9 337 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 EHBP1Q8NDI1 1231 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 CLSTN3Q9BQT9 956 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 MRPL45Q9BRJ2 306 aaKnown RBP13.96□□□□□ -0.17
VPS33A-202ENST00000451053 BCO2Q9BYV7 579 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 NIF3L1Q9GZT8 377 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 RXFP1Q9HBX9 757 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
VPS33A-202ENST00000451053 LMCD1Q9NZU5 365 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 MTRRQ9UBK8 725 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 DSEQ9UL01 958 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 GTPBP10A4D1E9 387 aaKnown RBP13.95□□□□□ -0.18
VPS33A-202ENST00000451053 GOLGA6L6A8MZA4 724 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 H7C4K7 107 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 TEX28O15482 410 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 AP5Z1O43299 807 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 TBC1D4O60343 1298 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 CNPP09543 421 aaKnown RBP13.95□□□□□ -0.18
VPS33A-202ENST00000451053 SLC9A1P19634 815 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 CDH8P55286 799 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 APBA1Q02410 837 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 NR1I3Q14994 352 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 TCEAL5Q5H9L2 206 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 ZNF280DQ6N043 979 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 TRIM65Q6PJ69 517 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 DPH6Q7L8W6 267 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 RBM23Q86U06 439 aaKnown RBP13.95□□□□□ -0.18
VPS33A-202ENST00000451053 METTL23Q86XA0 190 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 ARHGEF19Q8IW93 802 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 TMEM86AQ8N2M4 240 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 MICALL1Q8N3F8 863 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 OR10T2Q8NGX3 314 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 NT5C1BQ96P26 610 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 ARID3AQ99856 593 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 NSUN3Q9H649 340 aaKnown RBP13.95□□□□□ -0.18
VPS33A-202ENST00000451053 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS33A-202ENST00000451053 FNIP2Q9P278 1114 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 FBXL5Q9UKA1 691 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 SSX2IPQ9Y2D8 614 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 NME7Q9Y5B8 376 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 BACE2Q9Y5Z0 518 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 CDY1Q9Y6F8 540 aa13.95□□□□□ -0.18
VPS33A-202ENST00000451053 GABRDO14764 452 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 PER2O15055 1255 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 CLASP2O75122 1294 aaKnown RBP13.94□□□□□ -0.18
VPS33A-202ENST00000451053 TACC1O75410 805 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 WEE2P0C1S8 567 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 P4HA1P13674 534 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 FOSL2P15408 326 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 WARSP23381 471 aaKnown RBP13.94□□□□□ -0.18
VPS33A-202ENST00000451053 PON1P27169 355 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 GTF2F1P35269 517 aaKnown RBP eCLIP13.94□□□□□ -0.18
VPS33A-202ENST00000451053 NRIP1P48552 1158 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 NDUFV1P49821 464 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 CREMQ03060 361 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 UBXN1Q04323 297 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 EXOC3L4Q17RC7 722 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 NAP1L5Q96NT1 182 aaPredicted RBP13.94□□□□□ -0.18
VPS33A-202ENST00000451053 TMEM209Q96SK2 561 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 EMILIN2Q9BXX0 1053 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 TLE6Q9H808 572 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 SIX2Q9NPC8 291 aa13.94□□□□□ -0.18
VPS33A-202ENST00000451053 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 A0A1W2PQC6 194 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 TEX33O43247 280 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 OR4Q2P0C623 313 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
VPS33A-202ENST00000451053 LMO2P25791 158 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 KLRC2P26717 231 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 OR1D2P34982 312 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 KLK7P49862 253 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 ARPP19P56211 112 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 HYAL1Q12794 435 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 CUL2Q13617 745 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 DUSP6Q16828 381 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 SLC8B1Q6J4K2 584 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 PHLDB3Q6NSJ2 640 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 DPY19L2P1Q6NXN4 242 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 GJB7Q6PEY0 223 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 THEM5Q8N1Q8 247 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 SPATA18Q8TC71 538 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 KAT5Q92993 513 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 IQCDQ96DY2 449 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 SNX25Q9H3E2 840 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms