RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ERVK-7P63135 1459 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ADGRB3O60242 1522 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ABCA6Q8N139 1617 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RNF103-CHMP3A0A140T963 221 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ILVBLA1L0T0 632 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EME2A4GXA9 379 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 FAM83GA6ND36 823 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 LOC110117498-PIK3R3F6TDL0 507 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BTN3A3O00478 584 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EXTL3O43909 919 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SNAP91O60641 907 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 WBP4O75554 376 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 DNAJB5O75953 348 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CAMTA2O94983 1202 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 HSPA4LO95757 839 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ALBP02768 609 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TAC1P20366 129 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PRKACBP22694 351 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CIITAP33076 1130 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZNF76P36508 570 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CDK9P50750 372 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 GALK1P51570 392 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ITGA1P56199 1179 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PHC1P78364 1004 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GSTO1P78417 241 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PPP2R5DQ14738 602 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NECTIN1Q15223 517 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RPS6KA2Q15349 733 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZNF829Q3KNS6 432 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 TIMM50Q3ZCQ8 353 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZNF568Q3ZCX4 644 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SH3D19Q5HYK7 790 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BROXQ5VW32 411 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RAD9BQ6WBX8 426 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 FAM47EQ6ZV65 393 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TMC3Q7Z5M5 1100 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PRPF39Q86UA1 669 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ARHGEF19Q8IW93 802 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZBED8Q8IZ13 594 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MIGA1Q8NAN2 632 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NGDNQ8NEJ9 315 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PDCD6IPQ8WUM4 868 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 OSCP1Q8WVF1 389 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PIK3R3Q92569 461 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CEP95Q96GE4 821 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ART5Q96L15 291 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TCEAL7Q9BRU2 100 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 C6orf62Q9GZU0 229 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 MUC13Q9H3R2 512 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SMYD3Q9H7B4 428 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NPHS2Q9NP85 383 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CABP1Q9NZU7 370 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RAPGEFL1Q9UHV5 662 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC12A6Q9UHW9 1150 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 HAO1Q9UJM8 370 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TNNQ9UQP3 1299 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 AP3M1Q9Y2T2 418 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 AHDC1Q5TGY3 1603 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 CEP170BQ9Y4F5 1589 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 NCAPD2Q15021 1401 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 AATKQ6ZMQ8 1374 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BTBD11A6QL63 1104 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 C3orf80F5H4A9 247 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC16A3O15427 465 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PHGDHO43175 533 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PEX1O43933 1283 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TMCC2O75069 709 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GPC4O75487 556 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CCNE2O96020 404 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CALB1P05937 261 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RPS17P08708 135 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 NCF2P19878 526 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PTPREP23469 700 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TCF7P36402 384 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 NAMPTP43490 491 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 YARSP54577 528 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 RNASE9P60153 205 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 MECOMQ03112 1051 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TAP1Q03518 808 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NAB1Q13506 487 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TRIP13Q15645 432 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC18A3Q16572 532 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MOGQ16653 247 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 AOC3Q16853 763 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EXOC3L4Q17RC7 722 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 DCAF17Q5H9S7 520 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 C1QTNF12Q5T7M4 302 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC9C2Q5TAH2 1124 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TTC39BQ5VTQ0 682 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 KIAA0408Q6ZU52 694 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KRT74Q7RTS7 529 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 WAPLQ7Z5K2 1190 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ARPINQ7Z6K5 226 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CLVS1Q8IUQ0 354 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PDIK1LQ8N165 341 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EFCAB3Q8N7B9 438 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PCYOX1LQ8NBM8 494 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 FBXL13Q8NEE6 735 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ENGASEQ8NFI3 743 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TPCN2Q8NHX9 752 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms