RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 NT5DC4Q86YG4 428 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 MYLIPQ8WY64 445 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 UROC1Q96N76 676 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 XYLT2Q9H1B5 865 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 RWDD3Q9Y3V2 267 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 NUB1Q9Y5A7 615 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 MTCL1Q9Y4B5 1905 aaKnown RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 TMEM189-UBE2V1I3L0A0 370 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 IKBKBO14920 756 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 HCRTO43612 131 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 PPM1AP35813 382 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 LMAN1P49257 510 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 PRSS55Q6UWB4 352 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 ADGRD2Q7Z7M1 963 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 DDX53Q86TM3 631 aaKnown RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 CDX2Q99626 313 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 THAP9Q9H5L6 903 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 ADAM21Q9UKJ8 722 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 ITGA11Q9UKX5 1188 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 KCNJ18B7U540 433 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 HLA-DRAP01903 254 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 RPL17P18621 184 aaKnown RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 PSEN1P49768 467 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 KCNH2Q12809 1159 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 NCOA4Q13772 614 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 KCNJ12Q14500 433 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 CT47A1Q5JQC4 288 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 MIIPQ5JXC2 388 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 PLPP4Q5VZY2 271 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 RSPO2Q6UXX9 243 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-203ENST00000449575 CCDC91Q7Z6B0 441 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 TSPAN18Q96SJ8 248 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 TCF25Q9BQ70 676 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 ZBP1Q9H171 429 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 LCMT1Q9UIC8 334 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 MYH10P35580 1976 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 A0A0C4DFX4 3053 aa10.56□□□□□ -0.72
CCDC171-203ENST00000449575 TMEM265A0A087WTH1 108 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 PHACTR2O75167 634 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 SOD2P04179 222 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 ZNF18P17022 549 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 FMO5P49326 533 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 AARSP49588 968 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC171-203ENST00000449575 RBP5P82980 135 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 APBA1Q02410 837 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 KRT17Q04695 432 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 PTPN21Q16825 1174 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 TCP11X2Q5H9J9 407 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 TMC7Q7Z402 723 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 GLYCTKQ8IVS8 523 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 REXO1L1PQ8IX06 675 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 HPDLQ96IR7 371 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 SENP8Q96LD8 212 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 APOBEC3GQ9HC16 384 aaKnown RBP10.55□□□□□ -0.72
CCDC171-203ENST00000449575 METTL14Q9HCE5 456 aaKnown RBP10.55□□□□□ -0.72
CCDC171-203ENST00000449575 TMEM8AQ9HCN3 771 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 TLR9Q9NR96 1032 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 CHST7Q9NS84 486 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 TAB2Q9NYJ8 693 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC171-203ENST00000449575 KPNA7A9QM74 516 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 PER2O15055 1255 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 ADAM12O43184 909 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 IGFBP4P22692 258 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 MTIF2P46199 727 aaKnown RBP10.55□□□□□ -0.72
CCDC171-203ENST00000449575 TAF6P49848 677 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 MXI1P50539 228 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 KRT39Q6A163 491 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 SUGP1Q8IWZ8 645 aaKnown RBP10.55□□□□□ -0.72
CCDC171-203ENST00000449575 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 BPIFA3Q9BQP9 254 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 TUBGCP2Q9BSJ2 902 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 CRACR2AQ9BSW2 395 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 NME7Q9Y5B8 376 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 SNX9Q9Y5X1 595 aa10.55□□□□□ -0.72
CCDC171-203ENST00000449575 SF3B1O75533 1304 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC171-203ENST00000449575 GOLGA6L9A6NEM1 432 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 M0QZQ0 153 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 ZSCAN12O43309 604 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 URI1O94763 535 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 GNA14O95837 355 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 CA8P35219 290 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 KRT31Q15323 416 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 CCDC142Q17RM4 750 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 KIAA0319Q5VV43 1072 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 APTXQ7Z2E3 356 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 MICAL1Q8TDZ2 1067 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 RIN2Q8WYP3 895 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 VPS16Q9H269 839 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 ENTPD7Q9NQZ7 604 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 MTCH2Q9Y6C9 303 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 CYB561D2O14569 222 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms