RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 LBHD1Q9BQE6 289 aaPredicted RBP20.56■□□□□ 0.88
RPS28-202ENST00000449223 MRPL45Q9BRJ2 306 aaKnown RBP20.56■□□□□ 0.88
RPS28-202ENST00000449223 CWH43Q9H720 699 aa20.56■□□□□ 0.88
RPS28-202ENST00000449223 DSEQ9UL01 958 aa20.56■□□□□ 0.88
RPS28-202ENST00000449223 NENFQ9UMX5 172 aa20.56■□□□□ 0.88
RPS28-202ENST00000449223 NRP1O14786 923 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 ALDH2P05091 517 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 ITGB1P05556 798 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 GALTP07902 379 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 ODC1P11926 461 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 GNA15P30679 374 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 OR1G1P47890 313 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 NDST1P52848 882 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 ZSCAN30Q86W11 494 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 ADGRF2Q8IZF7 708 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 TNS4Q8IZW8 715 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 TMEM176AQ96HP8 235 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 TWNKQ96RR1 684 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 AGPAT1Q99943 283 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 NT5C1AQ9BXI3 368 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 DEF6Q9H4E7 631 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 ACP6Q9NPH0 428 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 CXXC1Q9P0U4 656 aaPredicted RBP20.55■□□□□ 0.88
RPS28-202ENST00000449223 HMGXB4Q9UGU5 601 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 KIAA1257Q9ULG3 409 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 STXBP5LQ9Y2K9 1186 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 NR2E3Q9Y5X4 410 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 ATP8B3O60423 1300 aa20.55■□□□□ 0.88
RPS28-202ENST00000449223 TRAPPC3O43617 180 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 AKR1B10O60218 316 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 CHRNB2P17787 502 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 TYMPP19971 482 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 SLC11A1P49279 550 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 TOGARAM2Q6ZUX3 1019 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 GPIHBP1Q8IV16 184 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 SLC20A1Q8WUM9 679 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 RABGGTAQ92696 567 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 COLEC11Q9BWP8 271 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 ELOVL4Q9GZR5 314 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 MTIF3Q9H2K0 278 aaKnown RBP20.54■□□□□ 0.88
RPS28-202ENST00000449223 MARCH5Q9NX47 278 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 ADAMTS1Q9UHI8 967 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 ADAM28Q9UKQ2 775 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 NME7Q9Y5B8 376 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 ADGRG1Q9Y653 693 aa20.54■□□□□ 0.88
RPS28-202ENST00000449223 A0A087X0T9 212 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 F8W810 466 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 DDX3XO00571 662 aaKnown RBP eCLIP20.53■□□□□ 0.889e-49■■□□□ 14.1
RPS28-202ENST00000449223 ZNF263O14978 683 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 EFEMP2O95967 443 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 FAM228BP0C875 321 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 LHX1P48742 406 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 FMO1Q01740 532 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 DSTYKQ6XUX3 929 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 CRYBG2Q8N1P7 616 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 LNX1Q8TBB1 728 aaPredicted RBP20.53■□□□□ 0.88
RPS28-202ENST00000449223 HCSTQ9UBK5 93 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 PCDHB8Q9UN66 801 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 FAN1Q9Y2M0 1017 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 KIAA1671Q9BY89 1806 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 VWA8A3KMH1 1905 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 ZBBXA8MT70 800 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 SYN3O14994 580 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 GNL1P36915 607 aaPredicted RBP20.53■□□□□ 0.88
RPS28-202ENST00000449223 BRCC3P46736 316 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 BCAR1P56945 870 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 KRT83P78385 493 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 PAN2Q504Q3 1202 aaKnown RBP20.53■□□□□ 0.88
RPS28-202ENST00000449223 ZNF394Q53GI3 561 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 WSCD1Q658N2 575 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 TMCO2Q7Z6W1 182 aaPredicted RBP20.53■□□□□ 0.88
RPS28-202ENST00000449223 GLYCTKQ8IVS8 523 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 ZNF606Q8WXB4 792 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 DNAI2Q9GZS0 605 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 NAGPAQ9UK23 515 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 PCDHGC3Q9UN70 934 aa20.53■□□□□ 0.88
RPS28-202ENST00000449223 PRG3Q9Y2Y8 225 aaPredicted RBP20.53■□□□□ 0.88
RPS28-202ENST00000449223 REXO2Q9Y3B8 237 aaKnown RBP20.53■□□□□ 0.88
RPS28-202ENST00000449223 IPO7O95373 1038 aaKnown RBP20.52■□□□□ 0.87
RPS28-202ENST00000449223 VDRP11473 427 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 GZMAP12544 262 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 ALDH7A1P49419 539 aaKnown RBP20.52■□□□□ 0.87
RPS28-202ENST00000449223 GFPT1Q06210 699 aaPredicted RBP20.52■□□□□ 0.87
RPS28-202ENST00000449223 ELAVL2Q12926 359 aaKnown RBP20.52■□□□□ 0.87
RPS28-202ENST00000449223 STILQ15468 1287 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 C10orf76Q5T2E6 689 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 TRIM72Q6ZMU5 477 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 OR6B3Q8NGW1 331 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 SP7Q8TDD2 431 aaPredicted RBP20.52■□□□□ 0.87
RPS28-202ENST00000449223 ZSWIM1Q9BR11 485 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 SNX25Q9H3E2 840 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 SPTLC3Q9NUV7 552 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 INSL6Q9Y581 213 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 SLC4A7Q9Y6M7 1214 aa20.52■□□□□ 0.87
RPS28-202ENST00000449223 A8MXQ7 604 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 TADA2AO75478 443 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 MMEP08473 750 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 CCDC175P0C221 793 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 TNFAIP3P21580 790 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 BTG3Q14201 252 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms