RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ANKS1BQ7Z6G8 1248 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 PATL1Q86TB9 770 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 ZCRB1Q8TBF4 217 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 NSUN4Q96CB9 384 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 GCNAQ96QF7 691 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 REEP2Q9BRK0 252 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 FOXP3Q9BZS1 431 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 PLA2G4CQ9UP65 541 aa9.91□□□□□ -0.82
SYNPO2-204ENST00000448416 PIK3CDO00329 1044 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 CYP26A1O43174 497 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 AP1G1O43747 822 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 TGDSO95455 350 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 SLC12A3P55017 1021 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 HIC1Q14526 733 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 LPIN1Q14693 890 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 FASTKD3Q14CZ7 662 aaKnown RBP9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 CAVIN4Q5BKX8 364 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 OLFML1Q6UWY5 402 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 ZNF276Q8N554 614 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 METTL25Q8N6Q8 603 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 SETDB2Q96T68 719 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 UBE2TQ9NPD8 197 aaPredicted RBP9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 TAGLN3Q9UI15 199 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 SLC24A2Q9UI40 661 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 ADAMTS6Q9UKP5 1117 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 A0A1B0GUL6 1792 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 MTA2O94776 668 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 SERPINB6P35237 376 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 ARHGAP4P98171 946 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 MYL7Q01449 175 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 PDIA2Q13087 525 aaKnown RBP9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 EFHC1Q5JVL4 640 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 FBXL19Q6PCT2 694 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 NLRX1Q86UT6 975 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 SLC15A3Q8IY34 581 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 TTC17Q96AE7 1141 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 ZFRQ96KR1 1074 aaKnown RBP9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 SMYD3Q9H7B4 428 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 ACP6Q9NPH0 428 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 THEGQ9P2T0 379 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 MEIS1O00470 390 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 TM9SF1O15321 606 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 BIRC5O15392 142 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 UBE2SQ16763 222 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 MAP7D1Q3KQU3 841 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 PRPF39Q86UA1 669 aaKnown RBP9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 MKL1Q969V6 931 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 MPHOSPH6Q99547 160 aaKnown RBP9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 MRPL1Q9BYD6 325 aaKnown RBP9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 IKZF4Q9H2S9 585 aa9.9□□□□□ -0.82
SYNPO2-204ENST00000448416 CACNA1SQ13698 1873 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 E9PBE3 544 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 MED24O75448 989 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 PMLP29590 882 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 SLC5A2P31639 672 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 CCR3P51677 355 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 IRX4P78413 519 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 DLGAP5Q15398 846 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 ZNF804AQ7Z570 1209 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 BBS5Q8N3I7 341 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 SLC44A5Q8NCS7 719 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 HIPK4Q8NE63 616 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 HERPUD2Q9BSE4 406 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 RUSC1Q9BVN2 902 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 SSU72Q9NP77 194 aaKnown RBP9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 ITGB1BP2Q9UKP3 347 aa9.9□□□□□ -0.83
SYNPO2-204ENST00000448416 RSPH10B2B2RC85 870 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 RSPH10BP0C881 870 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 BGNP21810 368 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 PDE1BQ01064 536 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 MTMR2Q13614 643 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 KRT81Q14533 505 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 C12orf60Q5U649 245 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 FAM91A1Q658Y4 838 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 TMEM53Q6P2H8 277 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 KYAT3Q6YP21 454 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 RNF111Q6ZNA4 994 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 DQX1Q8TE96 717 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 PCDHB18PQ96TA0 734 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 RBM38Q9H0Z9 239 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 HTR3EA5X5Y0 456 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 WTIPA6NIX2 430 aaPredicted RBP9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 TBCAO75347 108 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 STAT3P40763 770 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 NCKAP1LP55160 1127 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 ANO5Q75V66 913 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 NOP9Q86U38 636 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 PASD1Q8IV76 773 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 CROCCP3Q8IVE0 287 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 BTBD9Q96Q07 612 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 MRPS26Q9BYN8 205 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 DNM3Q9UQ16 869 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 BCS1LQ9Y276 419 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 ZNF804BA4D1E1 1349 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 CAPN14A8MX76 684 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 UBAP1LF5GYI3 381 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 ATP2A1O14983 1001 aa9.89□□□□□ -0.83
SYNPO2-204ENST00000448416 SMARCA1P28370 1054 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms